Sentieon/sentieon-scripts

Stars
59
Rank 508,022 (Top 11 %)
Language
Shell
License
BSD 2-Clause "Sim...
Created over 4 years ago
Updated about 2 months ago

Sentieon/sentieon-scripts

Sentieon

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Helper scripts for biological data processing from Sentieon

sentieon-dnaseq

Sentieon DNAseq

hap-eval

A VCF comparison engine for structual variant benchmarking

sentieon-dnascope-ml

Sentieon DNAscope + Machine Learning Model

sentieon-docker

Example Dockerfiles for use with the Sentieon software

sentieon-models

Model files for Sentieon variant callers

Sentieon-WDL

WDL pipelines for the Sentieon tools

sentieon-matching-performance

Accuracy and runtime benchmarks for the Sentieon GATK-matching tools

sentieon-google-genomics

Run Sentieon pipelines on Google Cloud Platform

sentieon-amazon-omics

Sentieon pipelines for Amazon Omics

vcflib

An open-source Python library for parsing and manipulation of VCF

Sentieon-cwl

CWL pipelines for the Sentieon tools

Common Workflow Language

aws-benchmark-scripts

Scripts used in benchmarking Sentieon DNAseq and DNAscope pipelines on AWS EC2

terraform

Terraform configuration files for the Sentieon software

sentieon-cli

A command-line interface for Sentieon pipelines