RENCI/Segmentor

Stars
13
Rank 1,512,713 (Top 30 %)
Language
C++
License
MIT License
Created over 6 years ago
Updated over 1 year ago

RENCI/Segmentor

RENCI

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3D segmention tool

ADCIRCSupportTools

ncdot-road-safety

Jupyter Notebook

ctmd-dashboard

CellCycleBrowser

The Cell Cycle Browser (CCB) is an interactive tool for exploring, simulating, and perturbing the human cell cycle.

ninjato

Web-based segmentation tool for 3D tissue cleared microscopy images of nuclei.

tx-functional

Generic functional programming library for Python

fuse-immcellfie

Main API, tickets, and project board to be used by dashboards supporting ImmCellFIE project

adcircreg3simdb

ADCIRC Region 3 Simulation Database

Jupyter Notebook

covid-19

https://covid-19.renci.org

cmaq-exposure-api

CMAQ Exposures API

ctmd

apsviz-timeseriesdb

This repository contains the software for creating a Django Rest Framework application that serves gauge observation data from postgresql/timescaledb/postgis database.

GoUtils

Here we put something that should be part of the standard lib.

ElasticSearchDump

Lightweight tool for dumping ElasticSearch index to json file

edsreanalysisdoc

Documentation for accessing the RENCI/NOAA Reanalysis datasets

map-pipeline-schema

tx-pcornet-to-fhir

A command line tool for mapping PCORnet data to FHIR data format

ADRAS

ADCIRCtoGeotiff base code

adcirc2cog

The repo has software the creates and geotiff, and then converts is the a Cloud Optimized Geotiff (COG)

tx-parallex

tic-map-pipeline-script

sc-virtual-booth

RENCI'S SC21 Virtual Booth Site

adda_for_floodwater

da code for ecflow/floodwater

pds-med-map

RxNorm map provides a mapping between RxCUI codes and the ingredients' UMLSCUI codes.

Jupyter Notebook

pds

PDS application (tx-router plugin)

create-renci-app

cli to bootstrap RENCI-branded React application

APSViz-ui-data

Website/service that will return data to load the UI with data.

APSViz-Supervisor

K8s functionalities

APSViz-Settings

Website that will alter the APSVIZ supervisor job image names.

APSViz-Archiver

Archives data created by the APSVIZ tools

APSViz-collab-sync

APSViz-Msg-Handler

RabbitMQ message handlers for the APSViz project.

renciZone

The iRODS Zone for RENCI employees

dbuppy

dbuppy is a tool written in python that automates deployment of changes to PostgreSQL databases.

docker-davrods

An Apache WebDAV interface to iRODS in Docker

nc-enviroscan-client

pfasdata-backend

This repo contains the code to build the backend DRF, DB and NGINX docker containers for the PFAS project

pds-icd-map

ICD code mapping from 9 to 10 to 11 for better disease clustering.

react-starter