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EcologicalNetworks.jl
Everything you've never dreamed about measuring on ecological networks.manuscript-template
BioEnergeticFoodWebs.jl
A unified interface for simulations of the Bio-Energetic model on food websPLMT
Poisot Lab Manuscript TemplateGBIF.jl
Functions and types to access GBIF data from JuliaSimpleSDMLayers.jl
Simple layers for species distribution modeling and bioclimatic databetalink
MIRROR - beta diversity of species interaction networksSpeciesDistributionToolkit.jl
Work with species distributions in JuliaMangal.jl
Get data*. Make science*. (*: only if it's about ecological networks tho)LabPolicies
Be excellent to each other.MetawebTransferLearning
SpeciesInteractionNetworks.jl
Work on species interaction networks in Julialpbrim
LP & BRIM bipartite modularity detection in RNCBITaxonomy.jl
Wrapper around the NCBI taxonomy fileswebsite
Hugo sources for the lab's websiteEcologicalNetworksPlots.jl
Networks. Boil 'em mash 'em stick 'em in a stew. And now, plot 'em.Brim.jl
BRIM -- use EcologicalNetwork.jl insteadrInteract
Access data on ecological interactions from RPLPT
Presentation templateEssentialBiodiversityVariables.jl
Access to GEO BON's REST API for the EBVsSpatialProbabilisticMetaweb
Downscaling metawebs and playing with uncertainty in space. Published in Philosophical Transactions of the Royal Society B at https://doi.org/10.1098/rstb.2023.0166paco
Procrustes analysis of cophylogeniesSpatialBoundaries.jl
https://poisotlab.github.io/SpatialBoundaries.jl/Fauxcurrences.jl
Generates null models for species occurrence dataBiodiversityObservationNetworks.jl
Methods for optimizing the spatial location of biodiversity-observation-networksEcoNetworksLabs
Computer labs and notebooks for the upcoming book "Practical Analysis of Ecological Networks"2015_ms_scisoftware
ms_betacov_mapping
ms_svd_imputation
Imputation of missing interactions using SVDMS_network_els
ms_networks_boundaries
Where do networks stop?MangalSamplingStatus
Automated reporting of the coverage of the mangal.io database of species interactionsworldwide-links-prediction
Figures created for the first meeting of the Canadian metaweb working groupms_network_prediction
Making better network predictions through ML - done right!Love Open Source and this site? Check out how you can help us