• Stars
    star
    4
  • Rank 3,304,323 (Top 66 %)
  • Language
    HTML
  • Created over 8 years ago
  • Updated 8 months ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Resource for pathway analysis and Pathway Commons

More Repositories

1

cytoscape-sbgn-stylesheet

View biological networks via Cytoscape.js and sbgn-ml
JavaScript
59
star
2

factoid

A project to capture biological pathway data from academic papers
JavaScript
28
star
3

semantic-search

A simple semantic search engine for scientific papers.
Python
27
star
4

chibe

Pathway visualization and analysis tool for Pathway Commons and other BioPAX data
Java
13
star
5

grounding-search

A biological entity grounding search service
JavaScript
8
star
6

pcviz

Pathway Commons Bio Network Visualizer
JavaScript
8
star
7

biojs-pcviz

BioJS component for PCViz
JavaScript
6
star
8

cpath2

Biological pathway data integration and access platform (Pathway Commons)
Java
6
star
9

sbgnml-to-cytoscape

An npm module that converts xml based SBGN files to JSON for Cytoscape.js
JavaScript
5
star
10

about

Pathway Commons Home Page (/about/)
SCSS
3
star
11

pathway-commons-client

A library to facilitate access to the Pathway Commons 2 API
JavaScript
3
star
12

ncbiutils

A wrapper for retrieving records from PubMed
Python
2
star
13

app-ui

Web UI for accessing Pathway Commons data
JavaScript
2
star
14

CyPath2

Cytoscape 3 app that connects to PC2 (cpath2) and imports BioPAX sub-networks into Cytoscape 3 for analysis.
Java
2
star
15

pathways-search

A web app to search pathways in Pathway Commons
JavaScript
2
star
16

drugbank-to-biopax

DrugBank to BioPAX Level3 data converter.
Java
2
star
17

sifgraph-server

Pathway Commons binary SIF graph web service
Java
1
star
18

sifgraph

Modeling and querying support for SIF graphs
Java
1
star
19

hyper-recent

Hyper-recent article feed
JavaScript
1
star
20

ctd-to-biopax

Comparative Toxicogenomics Database (CTD) to BioPAX Level3 data converter.
Java
1
star
21

reconx-to-biopax

SBML to BioPAX Level3 converter, specific to the Recon2 data.
Java
1
star
22

mirtarbase-to-biopax

MiRTarBase to BioPAX Level3 data converter.
Java
1
star