• Stars
    star
    7
  • Rank 2,294,772 (Top 46 %)
  • Language
    Perl
  • Created over 7 years ago
  • Updated over 7 years ago

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Repository Details

‘Phylogenetic Aware Parsing Script’ (PAPS for short) is the last of a pipeline of three Perl scripts which allows the user to produce lists of homologous genes (proteins clustered using MCL) based on their taxonomic occupancy; this allows the user to infer the patterns of gene gains and losses across a phylogeny which can be customized by the user.