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  • Rank 3,963,521 (Top 79 %)
  • Language
    Julia
  • License
    MIT License
  • Created about 3 years ago
  • Updated 4 months ago

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Repository Details

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1

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OrdinalGWAS.jl

Genome-wide association studies (GWAS) for ordered categorical phenotypes
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VCFTools.jl

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TrajGWAS.jl

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OrdinalMultinomialModels.jl

ordered multinomial models
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MendelPlots.jl

Julia package for plotting results from GWAS
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Tutorials

Basic OpenMendel tutorials
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11

BGEN.jl

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VarianceComponentModels.jl

Utilities for fitting and testing variance component models
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13

WiSER.jl

Within-subject variance estimation by robust regression (WiSER)
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14

ASHG-OpenMendelWorkshop-2020-Oct

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OpenADMIXTURE.jl

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16

ADMIXTURE.jl

Julia wrapper of the ADMIXTURE program for estimating ancestry
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17

MendelBase.jl

MendelBase contains the base functions of OpenMendel.
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18

LangeSymposium-ProgrammingWorkshop-20202022

OpenMendel tutorials for Lange's Symposium Programming Workshop
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19

MendelGWAS.jl

This package performs standard Genome-wide Association Studies.
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20

TraitSimulation.jl

Simulate phenotypes from any GLM model
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21

GeneticCounseling_ASHG2019

Tutorials and data sets for ASHG 2019 workshop on Genetic Counseling.
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CodingStyle

Coding style guidelines for OpenMendel packages
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GeneticVariantBase.jl

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24

MendelTwoPointLinkage.jl

This analysis option performs two-point linkage analysis.
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25

MendelLocationScores.jl

This analysis option maps a trait via the method of Location Scores, i.e., multipoint linkage analysis.
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26

HaploADMIXTURE.jl

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27

MendelSearch.jl

MendelSearch is a program for function optimization. Search permits bounds and linear constraints to be imposed on parameters and, in statistical applications, computes asymptotic standard errors and correlations of parameter estimates.
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28

ClassicMendel

Official Mendel package distribution
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29

MendelGeneticCounseling.jl

This analysis option performs risk calculations for genetic counseling problems.
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30

MendelKinship.jl

This analysis option computes kinship and other identity coefficients.
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31

MendelGameteCompetition.jl

This analysis option implements a gamete competition analysis, which is a generalization of the TDT analysis.
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32

MendelGeneDropping.jl

This package performs gene dropping with several useful options for the output.
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33

MendelEstimateFrequencies.jl

This analysis option calculates a likelihood-based estimate of allele frequencies.
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34

QuasiCopula.jl

A Flexible Quasi-Copula Distribution for Statistical Modeling
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35

MendelAimSelection.jl

This analysis option selects the SNPs that are most informative at predicting ancestry for your data β€” the best Ancestry Informative Markers (AIMs).
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