Discover NKI-AI/dlup-lightning-mil Open Source project

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Python
License
Apache License 2.0
Created over 2 years ago
Updated over 2 years ago

NKI-AI

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dlup-lightning-mil is an installable repo to easily train deep learning classifiers/regressors on gigapixel histopathology images using DLUP datasets or extracted features from HISSL

direct

Deep learning framework for MRI reconstruction

Python

180

dlup

Dlup are the Deep Learning Utilities for Pathology developed at the Netherlands Cancer Institute

Python

ece_loss

A PyTorch implementation of the Exclusive Cross Entropy Loss.

Python

STAPLER

STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint TCRab-peptide input to predict TCRab-peptide specificity.

Python

xdrt

XDRT (XDR Toolkit) is a python toolkit to work with the Elekta XDR and XVI file formats.

Python

hissl

Histology Self-Supervised Learning

Python

kandinsky-calibration

Kandinsky conformal prediction for image segmentation algorithms

Python

hyperparameter-search-template

Python

dicomtk

DICOM Toolkit (dicomtk) is a Python library that parses a variety of dicom files into an SQLite database and can export to other formats.

Python

slidescore-api

Python utilities to interface with SlideScore

Python

slidescope

SlideScope is a web-based viewer to visualize outputs of computational pathology models

kosmos-documentation

Documentation for the use of the internal AI for Oncology cluster Kosmos

Makefile

NKI-AI/dlup-lightning-mil

NKI-AI

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