NIH-HPC/snakemake-class

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Created almost 7 years ago
Updated almost 4 years ago

NIH-HPC/snakemake-class

NIH-HPC

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Class materials for the NIH HPC snakemake class

python-in-hpc

Materials for a Python in HPC class

Jupyter Notebook

singularity-examples

example singularity definition files and demos

singularity-def-files

definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster

spark-slurm

Tool for running/managing ad hoc spark clusters on a Slurm cluster

gpu4singularity

Add GPU support to your Singularity container!

pbs2slurm

Translate PBS batch scripts to Slurm

swarm

Swarm is a script designed to simplify submitting a group of commands to the Biowulf cluster.

snakemake_profile

Minimal snakemake profile for biowulf cluster

julia-for-scientific-computing

Materials for introductory Julia class

biowulf_ray

Sample submit script for running ray on biowulf

portauthority

find a free TCP port

tensorflow

moved to https://github.com/NIH-HPC/singularity-examples