NHPatterson/regToolboxMSRC

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8
Rank 2,099,232 (Top 42 %)
Language
Python
License
Apache License 2.0
Created over 6 years ago
Updated almost 5 years ago

NHPatterson/regToolboxMSRC

NHPatterson

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Registration toolbox for microscopy images integrated in imaging mass spectrometry experiments

wsireg

multimodal whole slide image registration in a graph structure

napari-wsireg

Whole slide image registration through wsireg in napari.

napari-imsmicrolink

napari plugin for IMS - Microscopy registration through laser ablation marks.

simple-imzml-to-ometiff

Simple imzML to OME-TIFF for HuBMAP data ingestion

RegCombIMS

Code accompanying "Co-registration and analysis of multiple imaging mass spectrometry datasets targeting different analytes"

imsmicrolink-wsireg-notes

Notes to get started with imsmicrolink & wsireg

flexformatter

create and modify naming within bruker flexImaging .mis files with a simple GUI