NCGAS/HPC-Onboarding-for-Biologists-Fall-2019

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NCGAS/HPC-Onboarding-for-Biologists-Fall-2019

NCGAS

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Supercomputing For Everyone Series: HPC Onboarding for Biologists

de-novo-transcriptome-assembly-pipeline

Combined de novo transcriptome assembly - multiple assemblers - multiple parameters

Metagenomic-analysis-workshop

The National Center for Genome Analysis Support (NCGAS) offers a three-day workshop on High Performance Computing (HPC) usage and metagenomic analysis between October 7th to 9th, 2019.

Metagenomics-Workshop-Spring-2020

NCGAS is hosting a metagenomics workshop, focusing on whole genome sequencing metagenome analysis between April 20th to 22nd at Indiana University, Bloominton.

Transcriptome-Assembly-Workshop-Spring-2019

NCGAS national level workshop on de novo transcriptome assembly on April 29th to May 1st

Useful-Scripts

Some useful scripts we use all the time

PonyLinux

A fun pony-themed game for teaching bash shell

CEWiT-REU-Identifying-datasets-in-SRA-using-Jetstream

This is a workflow developed with CEWiT REU students and NCGAS (2018- 2019) to search the sequence read archive (SRA) to identify other datasets with a genome of interest.