NCAR/pynio

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Apache License 2.0
Created about 9 years ago
Updated 8 months ago

NCAR/pynio

NCAR

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PyNIO is a multi-format data I/O package with a NetCDF-style interface

PyNIO

PyNIO ("pie-nee-oh") is a Python module that allows read and/or write access to a variety of scientific data formats popular in climate and weather:

NetCDF3 / NetCDF4
GRIB1 / GRIB2
HDF4
HDF-EOS2
HDF-EOS5
Shapefile

PyNIO has a data model interface that is modeled on the NetCDF data model.

PyNIO is developed by the Computational and Information Systems Lab at the National Center for Atmospheric Research (NCAR).

NCAR is sponsored by the National Science Foundation. Any opinions, findings and conclusions or recommendations expressed in this material do not necessarily reflect the views of the National Science Foundation.

Installation

PyNIO can be installed on Linux and MacOS systems via conda:

conda create --name pyn_env --channel conda-forge pynio
source activate pyn_env

Documentation and support

PyNIO is currently documented as part of the PyNGL website.

PyNIO documentation
PyNGL gallery (includes PyNIO examples)
Email list support
Detailed download and installation instructions

Bug reports and feature requests

Use the GitHub issue tracker to submit a bug or request.

wrf-python

A collection of diagnostic and interpolation routines for use with output from the Weather Research and Forecasting (WRF-ARW) Model.

ncl

The NCAR Command Language (NCL) is a scripting language for the analysis and visualization of climate and weather data.

DART

Data Assimilation Research Testbed

VAPOR

VAPOR is the Visualization and Analysis Platform for Ocean, Atmosphere, and Solar Researchers

wrf_hydro_nwm_public

WRF-Hydro model code

ParallelIO

A high-level Parallel I/O Library for structured grid applications

pyngl

geocat-comp

GeoCAT-comp provides implementations of computational functions for operating on geosciences data. Many of these functions originated in NCL and were translated into Python.

WRFV3

This is the release repository for the Weather Research and Forecasting Model

ai4ess-hackathon-2020

Jupyter Notebook

bspline

Cubic B-Spline implementation in C++ templates

lrose-core

Core C/C++ code for LROSE.

CESM_postprocessing

Project repository for the CESM python based post-processing code, documentation and issues tracking.

rwrfhydro

A community-contributed tool box for managing, analyzing, and visualizing WRF Hydro (and NWM) input and output files in R.

icar

The Intermediate Complexity Atmospheric Research model (ICAR)

container-wrf

WRF in containers, related code and data sets for release purposes.

noahmp

Noah-MP Community Repository

geocat-examples

GeoCAT-examples provides a gallery of visualization examples demonstrating how to reproduce plots from NCL Applications scripts with packages in Python. It also includes some longer form examples demonstrating how to use functionality from various GeoCAT packages.

wrf_python_tutorial

Student Workbook Repository for the wrf-python Tutorial

Jupyter Notebook

GPU_workshop

FastEddy-model

An NSF NCAR developed, parallelized and GPU-resident, large-eddy simulation code for accelerated modeling of the atmospheric boundary layer.

Jupyter Notebook

ncar-python-tutorial

Numerical & Scientific Computing with Python Tutorial

Jupyter Notebook

wrf_hydro_py

Python API for the WRF-Hydro model

ccpp-physics

GFS physics for CCPP

lrose-titan

TITAN system within LROSE

hrldas

HRLDAS (High Resolution Land Data Assimilation System)

Jupyter Notebook

wrf_hydro_training

Jupyter notebooks for WRF-Hydro trainings

Jupyter Notebook

geocat-viz

GeoCAT-viz contains tools to help plot geoscience data, including convenience and plotting functions that are used to facilitate plotting geosciences data with Matplotlib, Cartopy, and other visualization packages.

cesm-lens-aws

Examples of analysis of CESM LENS data publicly available on Amazon S3 (us-west-2 region) using xarray and dask

Jupyter Notebook

PyReshaper

A package for converting NetCDF files from time-slice (history) format to time-series (single-variable) format.

WRF_DOCKER

WPS and WRF docker container, GNU MPI Build and Run

ADF

A unified collection of python scripts used to generate standard plots from CAM outputs.

pi-wrf

This repository hosts a Jupyter notebook based application of the Weather Research and Forecasting Model (WRF) on a Raspberry Pi (version 3 or higher).

Jupyter Notebook

hrldas-release

HRLDAS (High Resolution Land Data Assimilation System) containing the Noah-MP Land Surface Model

wrf_hydro_arcgis_preprocessor

CTSM-Tutorial

CTSM Tutorial Materials

Jupyter Notebook

music-box

A box/column model using MICM chemistry

GARD

Generalized Analog Regression Downscaling (GARD) code

container-dtc-nwp

End-to-end NWP systems in containers.

KGen

Fortran Kernel Generator

fields

ccpp-framework

Common Community Physics Package (CCPP)

Topo

NCAR Global Model Topography Generation Software for Unstructured Grids

rda-apps-clients

RDA apps clients. Subdirectories will be organized by language, e.g. python, perl, c++, bash

CUPiD

CUPiD is a “one stop shop” that enables and integrates timeseries file generation, data standardization, diagnostics, and metrics from all CESM components.

esmlab

Earth System Model Lab (esmlab). ⚠️⚠️ ESMLab functionality has been moved into <https://github.com/NCAR/geocat-comp>. ⚠️⚠️

esds

Repository for hosting material related to the Earth System Data Science (ESDS) initiative efforts

Jupyter Notebook

dask-tutorial

NCAR/CISL Dask tutorial (Spring 2023)

Jupyter Notebook

pop-tools

Tools to support analysis of POP2-CESM model solutions

CfRadial

NetCDF CF Conventions for radial coordinate data for RADAR and LIDAR

wrf_hydro_docker

Docker containers for the WRF-Hydro modeling system

iCESM1.2

Isotope-enabled CESM1.2

wrf_hydro_gis_preprocessor

MPAS-Workflow

Scripts for controlling DA workflows with MPAS-Model and mpas-bundle

notebook-gallery

Jupyter Notebook

WrfHydroForcing

Python forcing engine for WRF-Hydro

SPERR

SPERR is a lossy scientific (floating-point) data compressor that produces one of the best rate-distortion curves.

ldcpy

Statistical and visual tools for gathering metrics and comparing Earth System Model data files. A common use case is comparing data that has been lossily compressed with the original data.

ctsm_python_gallery

A place to put sample workflows and tools that use ctsm model output

Jupyter Notebook

pyAverager

A package used for computing averages from climate model output

echo-opt

Earth Computer Hyperparameter Optimization

GLOW

The GLobal airglOW Model

CESM-Tutorial

Jupyter Notebook

joai-project

jOAI is an OAI-PMH data provider and harvester Java web application

wrfcloud

WRF Cloud Framework

goes16ci

GOES-16 Convective Initiation Benchmark

Jupyter Notebook

GeoCAT

intake-esm-datastore

Intake-esm Datastore

Jupyter Notebook

ai4ess-hackathon-2020-notebooks

Jupyter Notebook

NCAR-Classic-Libraries-for-Geophysics

mlmicrophysics

Machine learning emulators for microphysical processes.

Jupyter Notebook

GMET

Gridded Meteorological Ensemble Tool

CVDP-ncl

The Climate Variability Diagnostics Package (CVDP) developed by NCAR's Climate Analysis Section is an analysis tool that documents the major modes of climate variability in models and observations.

ccpp-scm

CCPP Single Column Model

WPS

esm-collection-spec

Earth System Model Collection specification

ncar-jobqueue

Utilities for configuring dask-jobqueue with appropriate settings for NCAR clusters

NEON-visualization

Repository to include all neon-related visualization scripts.

Jupyter Notebook

mom6-tools

Tools to support analysis of CESM/MOM6 model solutions (mom6-tools)

rechunk_retro_nwm_v21

Rechunking retrospective runs to more approachable chunks in Zarr output.

Jupyter Notebook

RadarAnalysisTools

CEDRIC, SPRINT, PPI, CEDIO, and GRID2PS tools for radar data analysis

fire-indices

Code for calculating various fire indices for a research project about simultaneous large fires

watershed_tools

Methods for creating watershed discretizations for use in hydrological modeling or analysis. Examples use the SUMMA modeling Framework.

Jupyter Notebook

esds-funnel

A Python package to facilitate synthesis and analysis of Earth system data.

CESM-Lab-Tutorial

Tutorial Jupyter Notebooks for the 'CESM-Lab' environment

Jupyter Notebook

i-wrf

Integrated End-To-End WRF Containerized Framework

IPT

Emissions Model Interface Tool

CAM-chem

The Community Atmosphere Model with Chemistry

Jupyter Notebook

lrose-solo3

C++ version of solo polar radar data display and editor

CM1

Cloud Model 1 (CM1), a numerical model for idealized studies of the atmosphere

hydrology

The webpages of the NCAR/RAL/HAP Computational Hydrology Group

wrf_python_instructor

A collection of jupyter notebooks used for tutorials and workshops

Jupyter Notebook

amwg_dev

Repo to store model sandboxes and cases used for CAM development

ASAPPyTools

The ASAP Python Toolbox is a collection of stand-alone tools for doing simple tasks, from managing print messages with a set verbosity level, to keeping timing information, to managing simple MPI communication.

geocat-f2py

The GeoCAT-f2py repository wraps, in Python, the compiled language implementations of some of the computational functions found under the GeoCAT-comp umbrella. End users and pure Python developers need not concern themselves with this repo; instead engage with GeoCAT-comp!

GPEP

Jupyter Notebook

PyConform

A tool for converting CESM time-series output into CMIP6 standard time-series.

ML_workshop2023

Jupyter Notebook

Reorder

Radar data gridding tool

crux

Command line XML schema and Schematron validator