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lineages
Results from a model of global SARS-CoV-2 lineage competitionMolecularEvolution.jl
A Julia framework for developing phylogenetic modelsNextGenSeqUtils.jl
NextGenSeqUtils:WebBlast.jl
RobustAmpliconDenoising.jl
RobustAmpliconDenoising.jl:Rifraf.jl
The RIFRAF consensus algorithm.Diffusions.jl
RotationMap.jl
3D Rotation MapAssigningSecondaryStructure.jl
Simplified DSSP algorithm implemented in JuliaAPackOfTheClones
Backboner.jl
Molecular backbone geometry utilitiesTy1
NanobodyMiner
Conflux.jl
Single-node data parallelism in Julia with CUDAProteinChains.jl
CodonMolecularEvolution.jl
MultinomialLogisticGrowth
PORPIDpipeline
A pipeline for long-read UMI/PID sequencing of HIV amplicons.BayesInfectionProbability
SequenceMutationDistance.jl
SequenceMutationDistance.jl:EngineeredBCRseq
Repo for code and data associated with BCR processing.FuNGS
Contains code and intermediate data for the analysis of nanobody repertoires from the alpaca named "Funny".DPMeansClustering.jl
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