MetabolicEngineeringGroupCBMA/seguid

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Updated 10 months ago

MetabolicEngineeringGroupCBMA/seguid

MetabolicEngineeringGroupCBMA

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SEGUID v2: Checksums Circular, Linear, Single- and Double-Stranded Sequences

pydna-examples

Jupyter notebooks and data files that demonstrates how pydna can be used to simulate and document cloning.

old_site

This is our group website https://metabolicengineeringgroupcbma.github.io/

pydna_template

This is a template repository for a pydna documentation and simulation project.

Jupyter Notebook

ypk-xylose-pathways

Pereira, F., Azevedo, F., Parachin, N. S., Hahn-Hägerdal, B., Gorwa-Grauslund, M. F., & Johansson, B. (2016). Yeast Pathway Kit: A Method for Metabolic Pathway Assembly with Automatically Simulated Executable Documentation. ACS Synthetic Biology, 5(5), 386–394.

Cunha_et_al_2017

Costa, C. E., Romaní, A., Cunha, J. T., Johansson, B., & Domingues, L. (2017). Integrated approach for selecting efficient Saccharomyces cerevisiae for industrial lignocellulosic fermentations: Importance of yeast chassis linked to process conditions. Bioresource Technology, 227, 24–34.