ML-Bioinfo-CEITEC/ECCB2021

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ML-Bioinfo-CEITEC/ECCB2021

ML-Bioinfo-CEITEC

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ECCB2021 tutorial: Inside the ‘Black Box’: Explainable Deep Learning Models For Image and Sequence Classification

genomic_benchmarks

Benchmarks for classification of genomic sequences

Jupyter Notebook

ECCB2020

ECCB2020 tutorial: Using Deep Learning For Image and Sequence Analysis

Jupyter Notebook

ENNGene

ENNGene: an Easy Neural Network model building tool for Genomics

pknots_experiments

Models recognizing knotted x unknotted proteins from their sequence

Jupyter Notebook

ECCB2022

Deep Learning For Biological Sequence Data: From Convolutional Neural Networks To Transformers, our tutorial into DL presented at 21st European Conference on Computational Biology (ECCB)

Jupyter Notebook

DNA-pretraining

Jupyter Notebook

penguinn

GitHub mirror of GitLab penguinn repo

rbp

Python package providing tools for RNA Bioinformatics

Jupyter Notebook

mirna_binding

microRNA binding project repository

Jupyter Notebook