MG-RAST/ShockNodejs

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2
Language
JavaScript
Created about 13 years ago
Updated almost 13 years ago

MG-RAST/ShockNodejs

MG-RAST

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AWE

workflow and resource management system for bioinformatics data analysis

Shock

An object store for scientific data

MG-RAST

The MG-RAST Backend -- the API server

MG-RAST-Tools

Repository of script tools, examples, and contributed code for using the MG-RAST API

matR

Metagenomics Analysis Tools

pipeline

The MG-RAST pipeline

Common Workflow Language

kmerspectrumanalyzer

DRISEE

duplicate read inferred sequencing error estimator

MG-RASTv4

The MG-RAST frontend -- the JavaScript web site

M5nr

Skyport2

framework for large scale data management and reproducible multi-cloud workflow execution

MG-RAST-infrastructure

CoreOS/Fleet Infrastructure for MG-RAST

app-definitions-deprecated

dockerfiles, app-definitions and scripts to upload images to Shock

myM5NR

M5NRv2 -- non-redundant protein and rRNA database integration

Retina

JavaScript library used in MG-RAST and skycore

go-shock-client

go client library for Shock

mtfTools

prototype tool for working with GSC metagenome transport format

golib

ipy-mkmq

IPython Tools for analysis in MG-RAST KBase MatR QIIME

mtf

MG-RAST metagenomes in MTF format (prototype)

metazen

tech-report

MG-RAST manual and documentation

CWL-Tools

CWL Tool repository

Common Workflow Language

python-shock-client

command line client for Shock

mobedac

amplicon

Common Workflow Language

anl-seq-service

ebi-submitter

Tools for submitting public MG-RAST jobs to the EBI's ENA archive

dockbuild

Tool to build docker images defined in yaml file

autoskewer

Repository for wrapper scripts for adapter trimming of high throughput sequence data, mostly illumina.