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marugoto
Tools to build deep learning pipelines.HIA
Histopathology Image Analysisdeepmed
preProcessing
SWARM
Swarm Learning for computational pathologyswarm-learning-hpe
Experimental repo for Odelia project based on HPE platform. This repo contains multiple models for histopathology and radiology training.end2end-WSI-preprocessing
End-to-end pipeline to go from raw H&E slides to normalised extracted features for trainingpreprocessing-ng
Medical_LLM
Welcome to the Medical LLM repository, your premier gateway to a structured and meticulously designed pipeline exclusively crafted for large language models (LLMs) based medical projects.highres-WSI-heatmaps
llm-agent
LLM agents in medicinedl-mri
Deep Learning MRI image analysiscancer-metadata
machine-readable information for the TCGA dataset, mirrored from other sourcesSurvival
synth-user-study
A user study investigating how realistic are synthetic images created by generative AIwanshi-utils
Ultilities repo for visualizations and result assesmentsMediSwarm
MediSwarm is an open-source project for advancing medical deep learning using swarm intelligence and NVFlare. Developed by the Odelia consortium, it ensures data privacy through federated learning, enabling collaborative, decentralized model training across institutions for improved medical research and applications.Pathology_Adversarial
preprocessing-radiology
Repo for data preparation, extracting features from radimages. Adapt to marugoto attention MIL and the features are in h5thumbnail-classification
crc-models-2022
trained deep learning models for biomarker prediction from colorectal cancer pathology slides, 2022 editionvisualizing_image_embeddings
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