• Stars
    star
    5
  • Rank 2,861,937 (Top 57 %)
  • Language
    R
  • Created over 8 years ago
  • Updated 4 months ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Interactive visualization of Illumina methylation array data

More Repositories

1

ComBatHarmonization

Harmonization of multi-site imaging data with ComBat
R
262
star
2

neuroCombat

Harmonization of multi-site imaging data with ComBat (Python)
Python
123
star
3

MNITemplate

MNI152 Template
R
35
star
4

RAVEL

Intensity normalization of structural MRIs using RAVEL
HTML
26
star
5

neuroCombat_Rpackage

neuroCombat R package
R
21
star
6

TCGA_AB_Compartments

A/B compartments for 12 cancer types estimated from TCGA methylation data
R
18
star
7

HiC_AB_Compartments

12
star
8

EveTemplate

JHU-MNI-ss (Eve) Template
R
11
star
9

funnorm_repro

Funnorm reproducible analysis
R
10
star
10

scATAC_Compartments

A/B compartments from single-cell ATAC seq (scATAC)
R
4
star
11

crisprScore

On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Python
3
star
12

tcgaR

TCGA R Portal
R
2
star
13

Jipito

Personal R package
R
2
star
14

Statistics_for_genomics

Lab material for Statistics for Genomics class
HTML
2
star
15

neuroCombatData

Example dataset for neuroCombat in R
R
2
star
16

compartments_repro

Reproducible analysis of the compartments paper
R
2
star
17

HiC_AB_Compartments_Mouse

R
1
star
18

bioc2015methylation

Bioconductor tutorial for 450k methylation arrays
1
star
19

crisprScoreData

Pre-trained models for the crisprScore package
R
1
star
20

crisprDesignData

R
1
star
21

arbalist

Migrating ArchR's core functionality to Bioconductor
C++
1
star
22

crisprBase

Base functions and classes for CRISPR gRNA design
R
1
star
23

crisprDesign

Core functions for CRISPR design
R
1
star
24

crisprBowtie

Bowtie-based alignment of CRISPR gRNA spacer sequences
R
1
star
25

crisprDesignPaper

Manuscript and analyses for crisprDesign manuscript
TeX
1
star