Jfortin1/HiC_AB_Compartments_Mouse Jfortin1/HiC_AB_Compartments_Mouse

  • Stars
    star
    1
  • Language
    R
  • Created almost 8 years ago
  • Updated over 7 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
Jfortin1/HiC_AB_Compartments_Mouse
github

Jfortin1

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

More Repositories

1

ComBatHarmonization

Harmonization of multi-site imaging data with ComBat
R
262
star
2

neuroCombat

Harmonization of multi-site imaging data with ComBat (Python)
Python
123
star
3

MNITemplate

MNI152 Template
R
35
star
4

RAVEL

Intensity normalization of structural MRIs using RAVEL
HTML
26
star
5

neuroCombat_Rpackage

neuroCombat R package
R
21
star
6

TCGA_AB_Compartments

A/B compartments for 12 cancer types estimated from TCGA methylation data
R
18
star
7

HiC_AB_Compartments

12
star
8

EveTemplate

JHU-MNI-ss (Eve) Template
R
11
star
9

funnorm_repro

Funnorm reproducible analysis
R
10
star
10

shinyMethyl

Interactive visualization of Illumina methylation array data
R
5
star
11

scATAC_Compartments

A/B compartments from single-cell ATAC seq (scATAC)
R
4
star
12

crisprScore

On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
Python
3
star
13

tcgaR

TCGA R Portal
R
2
star
14

Jipito

Personal R package
R
2
star
15

Statistics_for_genomics

Lab material for Statistics for Genomics class
HTML
2
star
16

neuroCombatData

Example dataset for neuroCombat in R
R
2
star
17

compartments_repro

Reproducible analysis of the compartments paper
R
2
star
18

bioc2015methylation

Bioconductor tutorial for 450k methylation arrays
1
star
19

crisprScoreData

Pre-trained models for the crisprScore package
R
1
star
20

crisprDesignData

R
1
star
21

arbalist

Migrating ArchR's core functionality to Bioconductor
C++
1
star
22

crisprBase

Base functions and classes for CRISPR gRNA design
R
1
star
23

crisprDesign

Core functions for CRISPR design
R
1
star
24

crisprBowtie

Bowtie-based alignment of CRISPR gRNA spacer sequences
R
1
star
25

crisprDesignPaper

Manuscript and analyses for crisprDesign manuscript
TeX
1
star