JCVenterInstitute/PanGenomePipeline

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13
Rank 1,485,410 (Top 30 %)
Language
Perl
License
GNU General Publi...
Created almost 8 years ago
Updated almost 2 years ago

JCVenterInstitute/PanGenomePipeline

JCVenterInstitute

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PanGenomePipeline

NSForest

A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA sequencing

FRmatch

Cell type matching in single-cell RNA-sequencing data using FR-Match

VIGOR4

OMeta-Public

GGRaSP

PanACEA

PanACEA is a suite of PERL scripts that allows for visualization of prokaryotic pan-chromosomes, including core and variable regions.

DAFi-gating

VIGOR_DB

celligrate

Software suite for marker gene identification and cell type integration from single cell RNA-sequencing data

Jillion

LinearDisplay

LinearDisplay.pl is a program that generates publication quality linear maps of user-defined genetic features (e.g., ORFs, promoters, transcriptional terminators, restriction enzyme recognition sites, primer-binding sites, phage attachment sites, target site duplications, assembly/contig breaks and RNA structures). It can also depict circular clusters like those used in network diagrams.

GUID

pathseq2taxsummary