• Stars
    star
    40
  • Rank 680,660 (Top 14 %)
  • Language
    Java
  • License
    Other
  • Created about 11 years ago
  • Updated 6 months ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

Web based Registry platform for managing synthetic biological parts

More Repositories

1

ART

A machine learning tool to improve the effectiveness of strain engineering in synthetic biology
Jupyter Notebook
54
star
2

KineticLearning

Learning Kinetic Models from Time Series Proteomics and Metabolomics Data
Jupyter Notebook
28
star
3

foldy

Foldy: a web-based platform for interactive protein structure analysis
TypeScript
21
star
4

prpr

Python
16
star
5

edd

Repository of standardized biological experimental data and metadata
Python
14
star
6

vectoreditor

Web based DNA sequence editing and analysis tool
ActionScript
14
star
7

jqmm

JBEI Quantitative Metabolic Modeling library
Jupyter Notebook
11
star
8

clusterCAD

A computational platform for type I modular PKS and NRPS design
Scheme
11
star
9

dnada

DNAda is a web application that integrates the J5 DNA assembly software with robotic liquid handlers
Python
8
star
10

MiSeqValPipeline

Sequence Validation Pipeline for JBEI
Python
3
star
11

PIACE

Parallel Integration and Chromosomal Expansion of Metabolic Pathways Machine Learning Analysis
Jupyter Notebook
3
star
12

CASdesigner

A Web tool to help you design donor DNA cassettes for genomic integration
Jupyter Notebook
3
star
13

bayflux

Software tool for Bayesian genome scale 13C Metabolic Flux Analysis
Jupyter Notebook
3
star
14

OMG

Generate simulated -omics data for testing on Arrowland and EDD
Jupyter Notebook
3
star
15

casdesigner-web

Web app version of CASdesigner
Python
2
star
16

dnassemble-gui

HTML
1
star
17

library_loading_concentration_prediction

A tool to predict library loading concentration from cluster density and bioanalyzer data.
Jupyter Notebook
1
star
18

limitfluxtocore

JBEI Limit Flux To Core (lftc) Python library
Jupyter Notebook
1
star
19

dna-constructor

HTML
1
star
20

parpar

1
star
21

biosensor_characterization_public

Code for MCMC Analysis of Transcription Factor Based Biosensors
Jupyter Notebook
1
star
22

bioflex

ActionScript
1
star
23

basebuddy

A web app for recoding genes by organism.
Jupyter Notebook
1
star