Discover INSIGNEO/MA-SOCRATIS Open Source project by @INSIGNEO

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GNU General Publi...
Created about 4 years ago
Updated about 2 years ago

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Multi-Atlas - Segmentation Of Cardiac Regions And Total Ifarct Scar (MA-SOCRATIS) is an unsupervised automatic pipeline that is capable of segmenting ventricular myocardium and scar from late gadolinium enhanced MR images (LGE-MRI) of left ventricle

openBF

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pFIRE

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openBF-db

openBF population generator

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MAF2Medical

A software application framework for the rapid development of computer aided medicine applications

C++

microFE

Jupyter Notebook

AFM_Youngs_modulus_fit

matlab coding for AFM raw data post-processing > Hertz model to obtain cell Young's modulus

MATLAB

DL-SOCRATIS

DL-SOCRATIS we use two different deep learning networks approaches. A combination of a convolution deep neural network for left ventricle detection, and an u-net LGE-MRI trained network for the myocardium segmentation (DLl-SOCRATIS). For the second approach we used a cycle-GAN network to translate the LGE-MR images to cine-MRI and segment the myocardium using an u-net network trained in cine-MR images (DLc-SOCRATIS).

Makefile

PyPeCT2S

A GUI built to provide a contained base for the automation of the CT2S pipeline. With specific focus on paediatric applications. Utilising ANSYS and other FEM solver tools.

Python

VPH-HF-rabbitmq-cli-client

A command line client interface to RabbitMQ

INSIGNEO/MA-SOCRATIS

INSIGNEO

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