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multi-area-model
A large-scale spiking model of the vision-related areas of macaque cortex.viziphant
Visualization of electrophysiological data from Elephantnetworkunit
A SciUnit library for validation testing of spiking neural network models.Python-Module-of-the-Week
nnmt
Neuronal Network Meanfield Toolbox - official documentation: https://nnmt.readthedocs.iohybridLFPy
Biophysics-based prediction of LFPs from point-neuron networksbeNNch
Modular performance benchmarking framework for neural network simulationsclosed-loop-learning-in-autonomous-agents
Simulation and analysis scripts for "A closed-loop toolchain for neural network simulations of learning autonomous agents".nestrl-tutorial
python-odmltables
An interface to convert odML structues to and from table-like representations, such as spreadsheetsswan
Swan (Sequential Waveform Analyzer) is an open-source graphical tool for tracking single units across multiple sessions of electrophysiological data that was recorded using chronically implanted microelectrode arrays.reproducing-polychronization
lif_meanfield_tools
LIF Meanfield Toolscorrelation-toolbox
Collection of functions to investigate correlations in spike trains and membrane potentialsBuilder
Compile scripts for local installs of software packagespython-gymz
gymz provides a light-weight wrapper for the OpenAI Gym to allow interaction with reinforcement-learning environments via ZeroMQ sockets.neural_network_meanfield
beNNch-models
PyNEST models for performance benchmarking with beNNchviziphant-new
Visualization of ElephantSAS
Assessing the similarity of real matrices with arbitrary shape.SPADE_applications
Repository containing code necessary to reproduce the results of Stella, A., Quaglio, P., Torre, E., & GrΓΌn, S. (2019). 3d-SPADE: Significance Evaluation of Spatio-Temporal Patterns of Various Temporal Extents. Biosystemsh5py_wrapper
A wrapper to conveniently store nested python dictionaries in hdf5 files.BNN_course_pub
pcp_use_cases
incapy
Interactive Neural Correlation Analyzer for Pythonnarci
narci is an ontology for calcium imaging experiments.datareport
Tool to combine YAML datasets with Jinja2-based templatesLove Open Source and this site? Check out how you can help us