INCATools/oakx-plugin-cookiecutter INCATools/oakx-plugin-cookiecutter

  • Stars
    star
    2
  • Language
    Python
  • Created about 2 years ago
  • Updated almost 2 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
INCATools/oakx-plugin-cookiecutter
github

INCATools

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

cookiecutter for OAK plugins

More Repositories

1

ontology-development-kit

Bootstrap an OBO Library ontology
Jinja
216
star
2

ontology-access-kit

Ontology Access Kit: A python library and command line application for working with ontologies
Jupyter Notebook
118
star
3

ubergraph

Integrated OBO ontology store
Makefile
42
star
4

dead_simple_owl_design_patterns

A simple system for specifying OWL class design patterns for OBO-ish ontologies.
Python
40
star
5

semantic-sql

SQL and SQLite builds of OWL ontologies
Python
37
star
6

boomer

Bayesian OWL ontology merging
Scala
26
star
7

dosdp-tools

Utility for working with DOSDP design patterns and OWL ontologies
Scala
23
star
8

obographviz

Customizable translation of OBO graphs to dot for visualization using graphviz and other tools
JavaScript
23
star
9

whelk

Whelk is an OWL EL reasoner
Scala
20
star
10

kgcl-rdflib

Tools for working with KGCL
Python
15
star
11

relation-graph

Materialize OWL existential relations
Scala
13
star
12

kgcl

Datamodel for KGCL (Knowledge Graph Change Language)
Python
11
star
13

whelk-rs

Whelk is an OWL EL reasoner
Rust
11
star
14

ontobot-change-agent

A GitHub bot for modifying ontology resources.
Python
10
star
15

intelligent-concept-assistant

5
star
16

oakx-grape

Experimental OAK plugin for Grape
Python
5
star
17

environments2wikidata

Mapping of GAZ and ENVO to Wikidata
Makefile
5
star
18

fantom5-ontology

ontology categorizing samples from FANTOM5 project
Web Ontology Language
5
star
19

ontology-term-usage

determines how an ontology term has been used
Python
4
star
20

table-editor

Lightweight CSV/TSV editor that supports autocomplete and is guided by a DOSDP-aware YAML configuration.
JavaScript
4
star
21

neoplasmer

Neoplasm Entity Recognition: matching disease names to ontology classes
Prolog
4
star
22

rdf_matcher

swi rdf_matcher
Prolog
3
star
23

pandasaurus_cxg

Ontology enrichment tool for CxG standard AnnData files
Jupyter Notebook
3
star
24

biosample-analysis

analysis of biosamples in INSDC
Jupyter Notebook
3
star
25

term-expando

Command line expansion of IDs and controlled terms in documents
Python
2
star
26

owl_patternizer

generate DOSDP patterns from OWL ontologies
Prolog
2
star
27

PandaSaurus

Supporting simple queries over ontology annotations in dataframes, using UberGraph queries
Python
2
star
28

rdf-sql-bulkloader

Python
1
star
29

whelk-paper

Code for Whelk performance analyses
Scala
1
star
30

verificado

Python
1
star
31

oakx-robot

robot plugin for OAK
Python
1
star
32

figtools

Scala toolkit for analyzing figshare figures
Scala
1
star