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HolyLabRegistry
Julia package registry for the Holy lab at Washington University in St. LouisRegisterQD.jl
Image registration with the QuadDIRECT optimization algorithmRegisterDeformation.jl
Representation of spatial deformationsGPCRAnalysis.jl
Routines for analysis of protein structuresBlockRegistration.jl
Deformable image registration via shift-alignment of blocksClusteringBenchmarks.jl
Data sets and metrics to evaluate clustering algorithmsGaussianRandomVariables.jl
Math (second-order accuracy) with random variablesImagineHardware.jl
Access hardware information for essential microscope components used in OCPI microscopes: piezo positioners, amplifiers, cameras, etcZWarpedArrays.jl
An image array type for which each 2D slice can (lazily) undergo a different affine coordinate transformationCachedArrays.jl
Arrays that cache elements in leading dimensionsFastScanning.jl
Determine camera/laser timing during fast OCPI acquisitions based on measured hardware responses.RegisterMismatch.jl
This package is separated from BlockRegistraton.InterleavedImages.jl
Lazy interleaving of images (arrays) along a chosen dimensionRegisterOptimize.jl
This package is separated from BlockRegistraton.ExtractPSF.jl
Find point emitters in images and extract point spread functionsRFFT.jl
In-place real FFTs for JuliaImagineInterface.jl
Read and write Imagine analog and digital recordings and commandsGsvdInitialization.jl
Discovery of "missing" directions in nonnegative matrix factorizationNMFMerge.jl
Merging components in nonnegative matrix factorizationRegisterWorkerShell.jl
This package is separated from BlockRegistratonScheduler.EconomicChoice.jl
Utilities for analyzing neuroeconomic choice experimentsImaginePlots.jl
Plotting of Imagine's hardware signals (complements ImagineInterface)Diffusion.jl
Simulations of diffusion on the disc with boundary conditonsImagineProcedures.jl
Link preparation with analysis of Imagine recordingsFastScanningAndDPI
Directory of code for OCPI fast scanning / DPI publicationEcoTrialStructure.jl
Data import for experiments on neuroeconomic decision-makingImageInterpLast.jl
Lazy interpolation of images along the last dimension (usually time)StitchDPI.jl
Align and stitch pairs of images acquired with a split field of viewRegisterPenalty.jl
This package is separated from BlockRegistraton.BlockRegistrationScheduler.jl
Multi-core image registration schedulerImagine
A graphical interface for recording with OCPI microscopes.WarpedImageSeries.jl
Lazy warping of a series (usually timeseries) of imagesRegisterCore.jl
Image registration (low-level types and utilities)Imagine.jl
Work-in-progress translation of Imagine to JuliaRegisterWorkerApertures.jl
This package is separated from BlockRegistratonScheduler.CachedInterpolations.jl
CachedInterpolations implements a performance enhancement for quadratic interpolation of a large multidimensional array. This package is separated from BlockRegistrationLove Open Source and this site? Check out how you can help us