HiDiHlabs/umi_alignment HiDiHlabs/umi_alignment

  • Stars
    star
    1
  • Language
    Python
  • License
    MIT License
  • Created 10 months ago
  • Updated about 2 months ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
HiDiHlabs/umi_alignment
github

HiDiHlabs

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

A snakemake pipeline for aligning UMI based WGS data and QC metrics associated with it

More Repositories

1

ssam

Python
25
star
2

htslib-js

CMake
10
star
3

PanCanQC

Perl
8
star
4

YAPSA

R
7
star
5

CRC_scRNAseq

Code for analysing single-cell data from colorectal cancer organoids
Jupyter Notebook
3
star
6

HeraldMoveSpacesExtension

Phabricator extension that teaches the Herald rule-bot about Spaces and how to set them.
PHP
2
star
7

ssam_example

SSAM examples
Jupyter Notebook
2
star
8

planktonpy

Analysis platform for spatial point processes in python
Jupyter Notebook
1
star
9

ssam-lite

HTML
1
star
10

preeclamspsia_Nonn_etal

A repository for code used to analyse data and create figures presented in Nonn et al., 2022 describing the single cell spatio-temporal landscape of placenta tissue in pre-eclampsia.
Jupyter Notebook
1
star