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BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomesAugustus
Genome annotation with AUGUSTUSGALBA
GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the scenario where high quality proteins from one or several closely related species are available.MakeHub
Fully automated generation of UCSC assembly hubsVARUS
RNA-Seq samplinglearnMSA
Learning and Aligning Large Protein Families (MSA-HMM)GUSHR
Generating UTRs from SHort ReadsGeometricHashing
Global, Highly Specific and Fast Filtering of Alignment SeedsPeptImprove
Pipeline for fully automated prokaryotic genome annotation with peptide data from MS/MS experimentspygustus
Python wrapper for AUGUSTUS.Love Open Source and this site? Check out how you can help us