Ettwiller/Trawler

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Created about 12 years ago
Updated about 12 years ago

Ettwiller/Trawler

Ettwiller

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Trawler is a integrated pipeline for the analysis of large scale chromatin-immunoprecipitation (ChIP) data and other large scale DNA-RNA datasets.

Damage-estimator

Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such as transposon based methods and Ultra II FS library preparation from NEB).

TSS

Program to manipulate and extract TSS from Cappable-seq experiments

RIMS-seq

Set of programs to analyze data derived from (Rapid Identification of Methylase Specificity) to simultaneously sequence bacterial genomes and determine m5C methylase specificities.