Discover EPCCed/Intro-to-HPC Open Source project by EPCC (@EPCCed)

Course materials for PRACE Introduction to Spark for Data Scientists.

prace-spark-for-data-scientists

epcc-openacc-benchmarks

EPCC OpenACC Benchmarks

archer2-CPP-2021-07-20

2019-08-27-ModernCpp

archer2-MPI-2020-05-14

Instructions for setting up a Raspberry Pi cluster.

wee_archlet

EPCC I/O benchmarking applications

benchio

Fortran

PythonHPC

HPC Python Workshop at RSECon22

archer2-cpp

ARCHER2 C++ course

ARCHER2 Advanced OpenMP course material

archer2-advanced-OpenMP

archer2-advanced-use-of-lammps

Repo for Advanced Use of LAMMPS course

ARCHER2 for Data Scientist course

archer2-data-science

bolt

Speedy batch job submission script production tool from EPCC (http://www.epcc.ed.ac.uk).

EIDF Services Documentation

MPI_OpenMP_tasks_OmpSs

eidf-docs

Ruby

APT-CPP

APT 2021-22: C++ for HPC

Documentation source for the EPCC SAFE.

safe-docs

pynmmso

Niching Migratory Multi-Swarm Optimser for Python

Single Node Optimisation Course Material

single-node-optimisation-course

ffs

Forward Flux Sampling

archer2-openmp-2022-08-30

Intro to OpenMP course material

adept-micro-omp

Adept Project Micro Benchmarks (OpenMP port)

wee_archie

Materials for June 2022 run of Advanced Message-Passing Programming for ARCHER2/PRACE

archer2-AMPP-2022-06-29

edat

Event driven asynchronous tasks

archer2-MPI-2023-02-22

Github site for run of Efficient Parallel IO on ARCHER2, Tuesday 23rd August 2022

archer2-parallelIO-2022-08-23

MetOfficeTrainingDec23

Met Office OpenMP and MPI course materials December 2023

APT-CUDA

Set of tools and documentation enabling the use of Blender for Scientific Visualisations

blender4science

Introductory GROMACS course on ARCHER2

archer2-AMPP-2021-07-14

APT-python4hpc

cirrus-docs

archer-python

20220421_GROMACS_introduction

Repository for Reframe configuration and tests for EPCC systems

epcc-reframe

HPC Carpentry: hpc-intro setup for ARCHER2

hpc-intro

Vim Snippet

archer2-OpenMP-2020-10-06

Shared Memory Programming with OpenMP

2019-04-16-ModernCpp

archer2-python

ARCHER2 Python course

Adept Kernel Benchmarks - OpenMP port

Resource_Manager

archer2-scalasca-2021-07-27

adept-kernel-openmp

cirrus-website

Cirrus HPC service website

Self checkout version of "QM/MM simulations with Gromacs + CP2K"

qmmm_gromacs_cp2k_sc

ramp

Materials for the March 2022 run of the MPI course on ARCHER2

GASPI_MPI

archer2-MPI-2022-03-23

archer2-intro-ds-and-ml

MSc Programming Skills - Git, GitLab, TravisCI lab. Contact: mikej888

git-github-travis-lab

archer2-MPI-2024-04-03

ARCHER2 Introduction to GPU programming with HIP course.

archer2-gpu-course

Adept Project Kernel Benchmarks (Serial port)

adept-kernel-serial

pynmmso-examples

Examples of use of pynmmso.

ARCHER2 Data Analytics using Python couse.

archer2-data-analytics-python

archer2-MPI-2021-03-17

Materials for 17th March 2021 run of ARCHER2 MPI course

Simulation and Machine Learning Integration -- an ExCALIBUR cross-cutting project

MPI_OpenMP_threads

SiMLInt

Description of how to run some of our outreach activities.

Activities

CSS

hemelb-hoff

Web service for remotely running the HemeLB application on Cirrus

2020-12-14-archer2-developers-online

eidf-status

Adept Project Kernel Benchmarks (MPI port)

adept-kernel-mpi

adept-rapl-lib

Adept Project RAPL Wrapper Library

DAwHPC

For EPCC DAwHPC practicals

Intro to OpenMP course material

archer2-OpenMP-2023-09-28

2022-07-27-hpc-intro-online

Vim Snippet

GASPI_SHAN

Documentation for EPCCs Fulhame system

fulhame-docs

Introductory training course for CS-2 SDK programming

cs2-sdk-training

HPC Carpentry. 29-30 June 2020.

archer2-AMPP-2024-06-27

archer2-hpc-2020-06-29

SchoolsIntroMaterial

Materials for ARCHER2 Advanced MPI course September 2023

archer2-AMPP-2023-09-06

PythonForHPCOverview

A (brief!) overview of how Python is used in HPC

2021-07-29_Singularity_Online

2022-07-26-hpc-shell-online

2023-03-28_docker-intro_online

MPIC eCSE parallelisation project

pmpic

Fortran

GASNet-AM-benchmarks

All relevant code and benchmarks for paper submitted to "Parallel Applications Workshop - Alternatives to MPI+X 2019".

remark_theme

EPCC Discover and Learn website

Flexible-Slurm-Configuration-for-Large-Scale-HPC

Lua

epccdiscover

Material for Efficient Parallel IO course on 11th January 2022

cq-spec

archer2-parallelIO-2022-01-11

archer2-python-2023-03-30

Course page of "ARCHER2 Data Analytics using Python"

OpenMP_Self_Service

OpenMP self service course material

MPI_Intro_Self_Service

29th June 2020 run of hpc-shell course for ARCHER2

hpc-shell-2020-06-29

nekbarebone is a cutdown version of nekbone, featuring just the original example2 nekbone test case.

nekbarebone

Fortran

sc19-analyzing_io_bof-archer_io

Presentation for SC19 BoF: Analyzing Parallel I/O (https://hps.vi4io.org/events/2019/sc-analyzing-io)

CSS

2020-12-08-Containers-Online

Lesson for 8 Dec 2020 run of containers course.

Distributed Grid Storage software, originally developed for UKQCD from 2002-2012

digs

hpc-shell

HPC Carpentry: hpc-shell setup for ARCHER2

2021-07-28_Containers_Online

Introduction to ARCHER2 for researchers using pre-installed software

archer2-intro-package

Documentation for the ATI Research Computing Services hosted at EPCC

ATI-ResComp-Service-docs

Sample configurations for the TRE Container Execution Service (CES)

tre-container-samples

Dockerfile

100

intro_to_cp2k