• Stars
    star
    1
  • Language
    Python
  • License
    GNU General Publi...
  • Created almost 7 years ago
  • Updated almost 3 years ago

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

More Repositories

1

mutatex

scripts and facilities for in-silico mutagenesis with FoldX
Python
49
star
2

RosettaDDGPrediction

Python
45
star
3

PDBminer

scripts to find PBD structures for cancer driver proteins
Python
29
star
4

pyinteraph2

development repository for PyInteraph2
Python
21
star
5

CAncer-bioMarker-Prediction-Pipeline-CAMPP

The Cancer bioMarker Prediction Pipeline (CAMPP)
R
17
star
6

MoonlightR

R
17
star
7

TCGAbiolinks_examples

repository with the scripts to run examples of the publications with new functionalities of TCGAbiolinks
R
14
star
8

pyinteraph

A software research tool for the analysis of structural communication in protein ensembles
Python
14
star
9

LUAD_LUSC_TCGA_comparison

Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data
R
11
star
10

MAVISp

the MAVISp database for structural variants annotation
Python
10
star
11

LipidDyn

repository associated to our pipeline for lipid dynamics
Python
7
star
12

psntools

Python
7
star
13

Moonlight2R

MoonlightR 2.0 development repository
R
5
star
14

xpyder

xPyder PyMOL Plugin
Python
5
star
15

cancermuts

Software for the automatic annotation of cancer mutations
Python
3
star
16

MAL_MD

repository associated to our study on conformational gating in ammonia lyase
PostScript
3
star
17

Mol-Analysis

Python
3
star
18

lc3b_cancer_paper

repository with data from our publication on lc3b dynamics and mutations
Python
2
star
19

environments_workshop

R
2
star
20

Proteomics-TIF

Bioinformatic Analysis of Proteomics Data From Breast Tumour Intersitital Fluid.
R
2
star
21

N-glycan-TIF

Scripts and Data associated to our publication on analyses of glycan profiling of breast cancer interstitial fluids
R
2
star
22

PyInKnife2

New version of the PyInKnife tool
Python
2
star
23

TARGET_NBL

repository for analyses of the TARGET-NBL dataset
R
2
star
24

bcl_bh3only_breast_cancer

repository for publication on bh3-only and bcl proteins in breast cancer
R
1
star
25

SNO_investigation_pipelines

Python
1
star
26

TRAP1_activity

R
1
star
27

miRNA-mRNA_TIF

repository for our publication on miRNA and mRNA of breast cancer
R
1
star
28

MD-wrapper

Pipeline for MD simulation
Python
1
star
29

YEAST_MEMBRANE_MD

Repository for the simulation data and analyses of our publication in collaboration with Chalmer's University on yeast membranes
Python
1
star
30

BCLxL-allo

repository associated to our publication on long-range communication in BCLxL
Python
1
star
31

ULK1_mutations

repository associated to our publication on ULK1 mutations and alterations in cancer
R
1
star
32

Moonlight2_case_studies

R
1
star
33

PCM1_LIR

repository for the data and scripts on our publication on PCM1 LIR
HTML
1
star
34

PyInKnife

Python
1
star
35

metaD_-GPR40-FFAR1

repository for metadynamics inputs of GPR40/FFAR1
1
star