Discover DaehwanKimLab/Chromosome-ReAD Open Source project

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MIT License
Created over 3 years ago
Updated over 2 years ago

DaehwanKimLab

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Chromosome-Recurrent Abnormality Detector (ReAD) is a neural network for automatically identifying structural rearrangements important in hematology oncology.

hisat2

Graph-based alignment (Hierarchical Graph FM index)

C++

473

centrifuge

Classifier for metagenomic sequences

C++

246

tophat

Spliced read mapper for RNA-Seq

C++

hisat

Fast spliced aligner with low memory requirements

C++

hisat-genotype

Python

seqwho

SeqWho - A reliable and rapid FASTQ(A) file classifier

Python

hisatgenotype_db

HISAT-genotype's database for human genes or genomic regions

lcc

life function compiler

Python

tophat2

tophat2 is exactly the same source as tophat (just naming convention), so please use tophat (https://github.com/infphilo/tophat)

UnrealCell

Biology data visualization framework in Unreal Engine 4

C++

SEClass

C++

DaehwanKimLab/Chromosome-ReAD

DaehwanKimLab

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