CTLife/SomeRecords

This repository has been archived on 28/Jan/2023
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Created almost 9 years ago
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CTLife/SomeRecords

CTLife

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Some very useful records for me.

2ndGS_Pipelines

Perl and R source codes for next generation (the second generation) sequencing data analysis by integrating lots of open-source softwares.

m6A-SAC-seq

Perl, Bash shell, and R scripts for m6A-SAC-seq data analysis.

PipiDABS

PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.

MDisProtein

Modelling and Prediction of protein distribution on subcellular and suborganelle level.

xQTLs

Scripts for various molecular quantitative trait locus (xQTL) analysis.

Scripts_Protocols

ART_Epigeome

Source codes for the ART_Epigenome project, "Epigenetic Consequences of Assisted Reproduction in the Human Offspring".

NucleosomeTurnover

Upstream and Downstream of locus-specific nucleosome turnover in adult mouse cardiomyocytes (as a instance or representation of non-proliferating mammalian cells).

CTLife.github.io

My Personal Website and Blog.

EED-HDAC

Bioinformatics analysis in EED-HDAC project, "Polycomb EED Orchestration of Heart Maturation is PRC2-independent".

xQTM

molecular quantitative trait methylation (QTM) analysis

sgRNA

Design genom-wide sgRNAs by using CRISPRseek.

Opposite-Sex-Twins_Epigenome

Opposite-Sex-Twins_Epigenome

MAPBS

An All-in-one and Easy-to-use DNA Methylation Analysis Pipeline for Bulk and Single-cell BS-Seq Data

Sequencing_DNA_RNA_Protein

Perl, R, Python, and Bash Shell source codes for high-throughput sequencing (the 2nd, 3rd, and 4th generation sequencing for DNA, RNA, and Protein) data analysis by integrating lots of open-source tools or softwares.