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exdir
Directory structure standard for experimental pipelines.spatial-maps
Analysis for spatially modulated spiking activity, e.g. place cells, grid cellsRippleNet
tracking-plugin
Open Ephys plugins for tracking experimentsexpipe
Experiment-data management platformNeuroCNN
pyopenephys
Python reader for open ephysLibrary
Overview of books for our libraryexana-legacy
Deprecated see requirements in cinpla-baseKNPsim
Simulator for ion concentrations using the electroneutral "Kirchoff-Nernst-Planck" (KNP) formalism in FEniCSEDPRmodel
An electrodiffusive, ion conserving Pinsky-Rinzel model with homeostatic mechanismsbiophysical_thalamocortical_system
Biophysical network modeling of the dLGN circuit: Effects of cortical feedback on spatial response properties of relay cellsPRmodel
An implementation of the Pinsky-Rinzel model in Pythonelegant-exdir
Simple, elegant C++ library for reading exdir filesMultiLinearPopulationAnalysis-MLPA
Example code for Multi-Linear Population Analysis (MLPA), Geddes et al.pyxona
Python library for reading Axona filescinpla-base
Repository to fork when you want to start a new projectspike-waveform
Analysis of spike waveformsexpipe-cinpla-legacy
All that was expipe and moreEDPRmodel_analysis
spike-statistics
Analysis of spiking stats e.g. correlogram etcphase-precession
Measures for phase precessiondata-management-workshop-NRSN-DLN-2019
Resources for the workshopelegant-npy
Simple, elegant C++ library for reading NumPy filesexdir-browser
hdf5-exdir-converter
A simple hdf5-exdir converterSkaar_et_al_2020_PLoS_Comput_Biol
expipe-plugin-cinpla
Plugins for expipe command line interfaceoscpack
Automatically exported from code.google.com/p/oscpackplace-stimulation
Analysis for the place cell electrical stimulation projectvisual-stimulation
Analysis of visual stimulation e.g. drifting gratings and stuffspikedynamics
Collection of cross-correlation functions. Work in progress.expipe-browser
Experiment browser for the analysis pipelineSummerSchool2015
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