Bayer-Group/scenarion

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Jupyter Notebook
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BSD 3-Clause "New...
Created about 5 years ago
Updated about 5 years ago

Bayer-Group/scenarion

Bayer-Group

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A scenario testing package that helps reveal learned relationships between features and the variables they're meant to predict. Use: 1) Build your classification/regression model using SciKit-Learn, keras, or otherwise, 2) pass your model over to Scenarion for scenario testing and visualization of results.

cloudformation-template-generator

A type-safe Scala DSL for generating CloudFormation templates

etcd-aws-cluster

A container to assist in managing a etcd2 cluster from an Amazon auto scaling group

paquo

PAthological QUpath Obsession - QuPath and Python conversations

tiffslide

TiffSlide - cloud native openslide-python replacement based on tifffile

ol-kit

Easy to use, open source React/Openlayers geospatial component toolkit.

goldengate-kafka-adapter

An adapter for Oracle GoldenGate to push change capture data directly to an Apache Kafka cluster

stax

AWS CloudFormation stack manager

column-resizer

Adds resizable columns to tables

stoop

Monadic Scala API for CouchDB

COLID-Documentation

The documentation repository is part of the Corporate Linked Data Catalog - short: COLID - application.

xsmiles

Visualize atom and non-atom attributions and SMILES strings

kamon-prometheus

A Kamon backend to support Prometheus

cellenium

Cellenium is a FAIR and scalable interactive visual analytics app for scRNA-Seq data (single-cell RNA sequencing).

Jupyter Notebook

cf-metrics

sas2r

Clinical trial data analytic recipes in R for SAS users

velocity-dashboard

React dashboard component

spray-kamon-metrics

Better Kamon metrics for Spray services

aws2scala

An idiomatic Scala wrapper of the AWS SDK with both asynchronous and streaming clients.

BayerCLAW

BayerCLAW workflow orchestration system for AWS

pado

PAthological Data Obsession - cloud native digital pathology datasets

mwundo

GeoJSON object, spray-json formats, and basic Geo/Geometry

eqgat

Research repository for the proposed equivariant graph attention network that operates on large biomolecules proposed by Le et al. (2022)

docker-min-jessie

Minimally sized Debian Jessie build

COLID-Setup

The setup repository is part of the Corporate Linked Data Catalog - short: COLID - application. It helps setting up a local environment based on Docker Compose.

pybalance

A library for minimizing the effects of confounding covariates

Jupyter Notebook

solvmate

xsmiles-jupyterlab

A JupyterLab plugin implementing the XSMILES visualization

cf-users

Application to manage users and privileges in Cloud Foundry.

mocka

Mocka is a mocking and stubbing package written for the Go programming language.

COLID-Data-Marketplace-Frontend

The Data Marketplace frontend repository is part of the Corporate Linked Data Catalog - short: COLID - application. Users can search for registered resources in COLID. It provides a search bar, aggregation filters and search result displaying including term highlighting.

mlr-xai-selfies

go-workshop

Structured hands-on workshop for learning Go

GeospatialSwift

Geospatial swift framework for GeoJson with geohashing, calculations, and much more

text-to-sql-epi-ehr-naacl2024

Code for Retrieval augmented text-to-SQL generation for epidemiological question answering using electronic health records

giae

Implementation of the Paper "Unsupervised Learning of Group Invariant and Equivariant Representations" presented at NeurIPS 2022.

Jupyter Notebook

chinese-restaurant-process

Highly optimized Scala implementation of Chinese Restaurant Process based non-parametric Bayesian clustering

CPMolGAN

xtars-naacl2022

Zero/few-shot learning for classification with very large label sets and long-tailed distribution of labels in data points

COLID-Editor-Frontend

The editor frontend repository is part of the Corporate Linked Data Catalog - short: COLID - application. It offers user an metadata based user interface to register resources in COLID.

BIC-BReasy

MOCCA

Parrot

Parrot is a compile-time Mock Generator for Swift - written completely in Swift. It's geared towards use in Xcode and works for any kind of swift project (e.g. server side, iOS, or command line tools). The mock structure is modeled off of the sinon.js APIs

simple-spray

Simple Spray Application Demo

COLID-AppData-Service

The appdata service repository is part of the Corporate Linked Data Catalog - short: COLID - application. It maintains the user data and application settings.

Github-Enterprise-Org-Explorer

react-color-a11y

React higher-order component to automatically enforce color accessibility

geostyler-geoserver-sld-parser

GeoStyler-Geoserver-Style-Parser implementation for SLD

passport-ping-oauth2

Ping OAuth 2.0 authentication strategy for Passport.

COLID-Reporting-Service

The reporting service repository is part of the Corporate Linked Data Catalog - short: COLID - application. It offers an API for statistics of registered resources.

xBCF

Predicting BCF values with explanations

COLID-Search-Service

The search service repository is part of the Corporate Linked Data Catalog - short: COLID - application. It makes the data findable and provides indexing and search functionalities based on Elasticsearch.

COLID-Indexing-Crawler-Service

The Indexing Crawler Service (ICS) repository is part of the Corporate Linked Data Catalog - short: COLID - application. It is responsible to extract data from a RDF storage system, transform and enrich the data and finally to send it via a message queue to the DMP Webservice for indexing.

pavo

PAthological Visualization Obsession - visualization playground for pado datasets

prom-cf-sd

GeospatialKit

Geospatial iOS framework for GeoJson with mapping, imaging, and everything from GeospatialSwift

glass-key

This is a common library which supports Play and Spray communicating as clients and resources for OAuth2.

open-nucleotides

Deep Learning Models Recognizing Genomic Regulatory Code

fRegGAN

atomic-spinner

Customizable React loading spinner that looks like an atom

express-client-validator

An express middleware to validate route clients

COLID-Scheduler-Service

The scheduler service repository is part of the Corporate Linked Data Catalog - short: COLID - application. It sets up recurring jobs for user notifications and analytics.

COLID-Registration-Service

The registration service repository is part of the Corporate Linked Data Catalog - short: COLID - application. It is the central microservice to register resources in the triplestore.

mitochondrial-tox

Supporting information from "Predicting the Mitochondrial Toxicity of Small Molecules: Insights From Mechanistic Assays and Cell Painting Data" by Marina Garcia de Lomana, Paula Andrea Marin Zapata, and Floriane Montanari

Jupyter Notebook

logstash-configs

Logstash config files

BIC-DetectoR

python-concentriq

r-cytoscape.js

An HTMLWidgets package for CytoscapeJS which can be used to produce standalone figure or for embedding in Shiny applications.

xtbf

Newick2Network

A Python tool to convert Newick trees to Cytoscape compatible networks

passport-gigya-oauth2

Gigya OAuth 2.0 authentication strategy for Passport.

algebraic-datatypes

Blog companion code

TimberSwift

A message forwarding framework for sending logs, analytics, performance, network activity, and other messages to the Parent Application

cdst

Jupyter Notebook

cf-portal

BIC-AdEPro

KGE-Frontend

WaterBase

torch_cddd

VCG-resampling

preparation for moving open source submission https://github.com/bayer-int/bayer-open-source-submissions/issues/31

httpbin

A simple docker container running httpbin

fleet-client

A Scala client for the fleet API

standards

Standards for contributing to MonsantoCo open source projects

PISA-T

MOCCA-frontend

BadranEtAl2015

Analysis scripts for Badran et al 2015

terraform-aws-autoken

🔒 GitHub Action for short lived credentials to access resources in CI/CD

GCDPrjct

BIC-subscreen

BIC-megaplots