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Homer3
MATLAB application for fNIRS data processing and visualizationBeam-Propagation-Method
AtlasViewer
MATLAB application for imaging and reconstruction of fNIRS data on atlas anatomypysnirf2
Python package for reading, writing and validating Shared Near Infrared Spectroscopy Format (SNIRF) filesOCTA
Optical Coherence Tomography Angiography Data ProcessingninjaGUI
fNIRS data acquisition GUINN22-Technical-Documents
Repository for the storage and dissemination of NN22 technical documentsVAN_DataSets
This project contains micro-Vascular Anatomical Network Data Sets from a consortium of research groups working to develop automated methods to analyze cerebral microvascular networks.PySpectralRadar
Python wrapper for Thorlabs SpectralRadar SDK C library using ctypesSpeckleNoiseModel
Code to model the noise of a fiber based NIRS system, as well as to plot the figures from associated papersfunctionalSpectralSpeckle
snirf_quality_report
snirf2bids
Python package for generating BIDS-fNIRS files from SNIRF filesg1OCTA
3D Optical Coherence Tomography Angiography for minimizing tail artifactsDynamicSpeckleModel
MonteCarloWaveModel
angioReg
register two volumetric angiograms together using an affine transformation then corrected by non-linear scattered data interpolationSerialSectOCT
DataTree
psoct_vessel_graphing
Suite of tools for segmenting vessels from PS-OCT images and then converting the segments to a graph.VAN_modeling
prDOCT
Phase resolved Doppler OCT for blood flow velocity imaging of capillary networkSpeckleDynamicsModelFitting
WavelengthSensitivityinFNIRS
vascularDataViz
Annotation_tools
MATLAB applications for myelin and cell annotation of qBRM and 2P imagesninjaNIRS21
rsfcIOS
calculate resting state functional connectivity from IOS data.DLSOCT
Dynamic Light Scattering-Optical Coherence Tomography data processing for blood flow velocity and diffusion coefficient measurementLove Open Source and this site? Check out how you can help us