BUNPC/Annotation_tools BUNPC/Annotation_tools

  • Stars
    star
    1
  • Language
    MATLAB
  • Created over 1 year ago
  • Updated over 1 year ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
BUNPC/Annotation_tools
github

BUNPC

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

MATLAB applications for myelin and cell annotation of qBRM and 2P images

More Repositories

1

Homer3

MATLAB application for fNIRS data processing and visualization
MATLAB
92
star
2

Beam-Propagation-Method

MATLAB
33
star
3

AtlasViewer

MATLAB application for imaging and reconstruction of fNIRS data on atlas anatomy
MATLAB
30
star
4

laserSpeckleImaging

Tools for processing laser speckle images from a camera
MATLAB
18
star
5

pysnirf2

Python package for reading, writing and validating Shared Near Infrared Spectroscopy Format (SNIRF) files
Python
15
star
6

OCTA

Optical Coherence Tomography Angiography Data Processing
MATLAB
15
star
7

ninjaGUI

fNIRS data acquisition GUI
MATLAB
9
star
8

NN22-Technical-Documents

Repository for the storage and dissemination of NN22 technical documents
C
5
star
9

VAN_DataSets

This project contains micro-Vascular Anatomical Network Data Sets from a consortium of research groups working to develop automated methods to analyze cerebral microvascular networks.
4
star
10

PySpectralRadar

Python wrapper for Thorlabs SpectralRadar SDK C library using ctypes
Python
4
star
11

SpeckleNoiseModel

Code to model the noise of a fiber based NIRS system, as well as to plot the figures from associated papers
MATLAB
3
star
12

functionalSpectralSpeckle

MATLAB
3
star
13

snirf_quality_report

Python
3
star
14

snirf2bids

Python package for generating BIDS-fNIRS files from SNIRF files
Python
3
star
15

g1OCTA

3D Optical Coherence Tomography Angiography for minimizing tail artifacts
MATLAB
3
star
16

DynamicSpeckleModel

MATLAB
3
star
17

MonteCarloWaveModel

C
3
star
18

angioReg

register two volumetric angiograms together using an affine transformation then corrected by non-linear scattered data interpolation
MATLAB
2
star
19

SerialSectOCT

C
2
star
20

DataTree

MATLAB
2
star
21

psoct_vessel_graphing

Suite of tools for segmenting vessels from PS-OCT images and then converting the segments to a graph.
MATLAB
1
star
22

VAN_modeling

MATLAB
1
star
23

prDOCT

Phase resolved Doppler OCT for blood flow velocity imaging of capillary network
MATLAB
1
star
24

SpeckleDynamicsModelFitting

MATLAB
1
star
25

WavelengthSensitivityinFNIRS

1
star
26

vascularDataViz

1
star
27

ninjaNIRS21

VHDL
1
star
28

rsfcIOS

calculate resting state functional connectivity from IOS data.
MATLAB
1
star
29

DLSOCT

Dynamic Light Scattering-Optical Coherence Tomography data processing for blood flow velocity and diffusion coefficient measurement
MATLAB
1
star