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FeGenie
HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomesSprayNPray
Rapid and simple taxonomic profiling of genome and metagenome contigsMagicLamp
A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.BagOfTricks
A collection of python and bash scripts for various bioinformatics-related tasksParaHunter
Identification of gene paralogs in genomes, and calculation of dS and dN/dS values for paralogous gene pairsLithoGenie
HMM-based identification and categorization of genes and operons relevant to chemolithoautotrophic metabolismsKOALA-formatter
Script for converting raw KO-number output from GhostKOALA and BlastKOALA into hierarchically-structured CSV formatFindMeHemes
Program for identifying and extracting genes with heme-binding motifs from a genome or metagenome/metatranscriptome assemblyARKTools
Collection of various bioinformatics tools for various things related to sequence analysis, plotting, etc.Love Open Source and this site? Check out how you can help us