AndreaGuarracino/WFPOA AndreaGuarracino/WFPOA

  • This repository has been archived on 07/Jun/2024
  • Stars
    star
    9
  • Rank 1,939,727 (Top 39 %)
  • Language
    C
  • License
    MIT License
  • Created about 4 years ago
  • Updated almost 3 years ago
Twitter logo Share LinkedIn logo Share Facebook logo Share
AndreaGuarracino/WFPOA
github

AndreaGuarracino

Reviews

There are no reviews yet. Be the first to send feedback to the community and the maintainers!

Repository Details

An extension to the wavefront algorithm that generalizes it to work on directed acyclic sequence graphs

More Repositories

1

paf2chain

convert PAF format to CHAIN format
Rust
24
star
2

chain2paf

convert CHAIN format to PAF format
Rust
12
star
3

DataStructuresForBioinformatics

Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata
Jupyter Notebook
9
star
4

1000G-ONT-F100-PGGB

PanGenome Graph Building with the first 100 assemblies from the 1000G ONT Sequencing Consortium
R
8
star
5

pafgnostic

Rust
5
star
6

rs-spodgi

Line-by-line converter from GFA to RDF (turtle)
Rust
3
star
7

ReferenceGraphPangenomeDataAnalysisHackathon2023

Material for the Reference Graph Pangenome Data Analysis Hackathon 2023, November 13-17 in Cape Town, South Africa
3
star
8

HG002_assemblies_assessment

Pangenomic assessment of HG002 assemblies
Jupyter Notebook
2
star
9

maftools

Python
1
star