Krauthammer Lab (@uzh-dqbm-cmi)
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Top repositories

1

ARGON

Progressive Transformer-Based Generation of Radiology Reports
Python
25
star
2

crispr

CSS
13
star
3

PRIDICT

Prime editing guide RNA prediction
Python
7
star
4

PRIDICT2

Python
7
star
5

side-effects

Python
6
star
6

auto-discern

Python
3
star
7

graphnn

Jupyter Notebook
3
star
8

eustar_dgm4h

Jupyter Notebook
3
star
9

Tnpb

Jupyter Notebook
3
star
10

fragmentstein

Create a BAM file out of insensitive fragments data (i.e. FinaleDB frag.tsv.bgz file) including sequences extracted from a reference genome.
Shell
2
star
11

Infusing_Prior

Official code implementation of the paper <Boosting Radiology Report Generation by Infusing Comparison Prior>
Python
2
star
12

NFC_VIT

This is the implementation of the work described in the paper "Vision Transformer assisting rheumatologists in screening for capillaroscopy changes in systemic sclerosis: an artificial intelligence model"
Python
2
star
13

hcup_research

Python
1
star
14

SeqAlign

Python
1
star
15

drug-prescriptions

Supplementary Data for the "Drug prescription clusters in the UK Biobank" project
1
star
16

cfDNA-Flow

A modular bioinformatics pipeline offering a range of preprocessing options for cell-free DNA (cfDNA) analysis.
HTML
1
star
17

singularity_recipes

Singularity image with toolbox for scRNA-seq analysis including some useful R packages
R
1
star
18

lab-website

TeX
1
star