Molecular Information Systems Lab (@uwmisl)
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uwmisl

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  • Stars
    star
    122
  • Global Org. Rank 52,511 (Top 17 %)
  • Registered almost 7 years ago
  • Most used languages
    Jupyter Notebook
         47.6 %
    Python
         28.6 %
    Rust
         9.5 %
    C#
         4.8 %
    C++
         4.8 %
    Cuda     4.8 %

Top repositories

1

puddle

A system for high-level, reliable programming of microfluidic devices
Rust
36
star
2

purpledrop

Newest iteration of PurpleDrop. Reimplemented in kicad5
14
star
3

data-nbt17

Data for paper "Random Access in Large-Scale DNA Data Storage"
11
star
4

NanoporeTERs

Code repository for 2019 NanoporeTERs paper.
Jupyter Notebook
7
star
5

Porcupine

Porcupine is a molecular tagging system to tag physical objects with DNA.
Jupyter Notebook
7
star
6

nupyck

efficient python bindings for NUPACK
Python
5
star
7

PASTOR-sequencing

Jupyter Notebook
5
star
8

primo-similarity-search

Code and models for the primo similarity search project
Jupyter Notebook
4
star
9

dna-nanopore-computing

Analysis pipeline for running DNA circuits on the nanopore
Jupyter Notebook
4
star
10

storage-biasing-ncomms20

data and codes for Nature Communicates 2020. Title: Quantifying Molecular Bias in DNA Data Storage
Jupyter Notebook
4
star
11

poretitioner

Python
3
star
12

cupyck

cuda-accelerated multistranded partition function
Cuda
3
star
13

combinatorial_primer_project

Jupyter Notebook
2
star
14

primo-openimages

VGG16-FC2 feature vectors for OpenImagesV4
Jupyter Notebook
2
star
15

dmfwizard

Python library for designing digital microfluidic electrode boards with KiCad
Python
2
star
16

end2endController

controller software for end2end project
Python
2
star
17

Deep-Molecules

Protein Sequence AutoEncoders
Jupyter Notebook
1
star
18

PorTis

Code repository and replication package for PorTis paper
Jupyter Notebook
1
star
19

primo-data

1
star
20

data-ncomms19-nanopore

data for Nature Communicates 2019. Title: DNA Assembly for Nanopore Data Storage Readout
1
star
21

2019-spotted-dna-data

Sequencing data for our 2019 Nature Communications paper
1
star
22

purpledrop-stm32

Embedded application to run on PurpleDrop STM32 controller
C++
1
star
23

purpledrop-software

Controller software for the PurpleDrop digital microfluidics platform
Rust
1
star
24

imgupload

C#
1
star
25

hamiltonPSD

simple serial protocol wrapper for hamilton PSD pumps.
Python
1
star
26

purpledrop-driver

Python driver and gateway for PurpleDrop USB devices
Python
1
star