Explore @usegalaxy-eu Open Source projects

useGalaxy.eu (@usegalaxy-eu)

usegalaxy-eu

Stars
266
Global Org. Rank 34,589 (Top 11 %)
Registered about 7 years ago
Most used languages

Python
48.8 %

Jinja 14.6 %

HCL 7.3 %

Dockerfile
4.9 %

Jupyter Notebook
4.9 %

Shell
4.9 %

HTML
4.9 %

JavaScript
2.4 %

CSS
2.4 %

TeX
2.4 %

SCSS 2.4 %
Location <UNKNOWN>
Country Total Rank 383

ena-upload-cli

ENA upload tool - script your Open Data upload to the European Nucleotide Archive

usegalaxy-eu-tools

List of tools included in https://usegalaxy.eu

ena-cog-uk-wfs

Collection of scripts for automated SARS-CoV-2 genome surveillance.

website

UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)

sars-cov-2-processing-requests

Request execution of Galaxy SARS-CoV-2 variation analysis workflows on input data you provide.

infrastructure-playbook

Ansible playbook for managing UseGalaxy.eu infrastructure.

workflow-testing

Automated testing of workflows against Galaxy

project-ideas

A collection of project ideas suitable for Master and Bachelor students

infrastructure

All of Galaxyproject EU's cloud infrastructure.

environmental_impact

Environmental Impact

gpu-jupyterlab-docker

GPU-enabled docker container with Jupyterlab for artificial intelligence

Jupyter Notebook

galaxy-social

Repository for democratising of Galaxy's social media activity - encourage collaboration, editing, peer-review of toots 🐘 and more

vgcn

Virtual Galaxy Compute Nodes (vgcn)

shared-data

Our shared data

operations

usegalaxy.eu operations

vgcn-infrastructure

Manage the VGCN Infrastructure https://github.com/usegalaxy-eu/vgcn/

workflow-automation-tutorial

pulsar-infrastructure

UseGalaxy.eu - managed Pulsar infrastructure

ansible-htcondor

Ansible role for installing HTCondor.

ansible-jcaas

Ansible role to deploy JCaaS

ansible-rabbitmq

cvmfs-example

branding

Branding resources

pulsar-deployment

Various terraform stuff

sorting-hat

UseGalaxy's very magical job sorting system ✨

galactic-radio-telescope

Galaxy Job Run Statistics

ansible-cuda

Ansible role to install the CUDA toolkit as described in the NVIDIA CUDA Installation Guide in a Redhat/CentOS system.

ansible-galaxy-systemd

Ansible roles for setting up SystemD for Galaxy

docker-ilastik

Docker image for Ilastik to be used as Galaxy IT

grafana-dashboards

UseGalaxy's Grafana Dashboards

ansible-collection-handy

galaxy-webhooks

galaxy-beacon-import

import variants from galaxy datasets to a beacon instance

ansible-traefik

An Ansible role that installs traefik

gcc2019

Lets collect logos and documents for the GCC2019 here ...

usegalaxy-eu.github.io

Deployed website (source is in https://github.com/usegalaxy-eu/website )

GalaxyBenchmarker

A tool for benchmarking Galaxy job destinations.

gdpr

Documentation regarding GDPR compliance, Privacy Policy, and ToS

temporary-tools

Non-reproducible, local tools that were installed to cn029

awesome-galaxy-histories

A curated list of awesome public Galaxy histories

ansible-nvidia-container

Ansible role to install the NVIDIA Container toolkit

pulsar-network-docs

Documentation for the Galaxy Pulsar network

docker-qgis

Docker image for QGIS to be used as Galaxy IT

ansible-rustus

Ansible role for installing rustus, a TUS protocol implementation written in Rust.

gpu-access-sync

european-galaxy-days-2018

European Galaxy Days 2018 - Logos, documents and issues

ansible-autoupdates

Setup Automatic Update using Dnf-automatic on CentOS 8 systems

ansible-influxdb-container

PathoGFAIR

PathoGFAIR: Galaxy FAIR Workflows for Pathogen Detection and Samples Comparison

Jupyter Notebook

intergalactic-most-wanted-list

A database for malware checksums for use with the WallE malware cleanup script

ansible-matrix-forwarder

Compiles https://gitlab.com/hectorjsmith/grafana-matrix-forwarder and starts it as systemd service

docker-copernicus-notebooks

gtn-downloader

Download GTN data and upload to Onedata cloud service