Statens Serum Institut (@ssi-dk)
Guthub

ssi-dk

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  • Stars
    star
    59
  • Global Org. Rank 73,849 (Top 24 %)
  • Registered over 7 years ago
  • Most used languages
    Python
         50.0 %
    R
         33.3 %
    Jupyter Notebook
         11.1 %
    SCSS     5.6 %
  • Location πŸ‡©πŸ‡° Denmark
  • Country Total Rank 1,604
  • Country Ranking
    R
         71
    SCSS     76
    Jupyter Notebook
         114
    Python
         339

Top repositories

1

CD-MRG-metabolomics_summerschool_2023

This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedical Research
Jupyter Notebook
12
star
2

serum_readfilter

Python
7
star
3

bifrost

6
star
4

SCDB

R package for maintaining data bases with slowly-changing-dimensions
R
6
star
5

GenEpi-BioTrain_Virtual_Training_7

All data used in the GenEpi-BioTrain Virtual Training 7 session on march 19-20, 2024
Python
5
star
6

miniLIMS

LIMS in development to be used in NGS facility
Python
5
star
7

bifrost-archive

Bacterial Surveillance platform, focused on QC in Denmark
Python
3
star
8

microreact_integration

Python code for integrating with Microreact
Python
3
star
9

diseasystore

R package that provides a feature store tailored towards disease modelling
R
2
star
10

diseasy

R
2
star
11

CD-MRG-PlatePlanner

Python package to create multi-well plate layouts for specimen sample data. Automatically distributes quality control samples according to scheme in config file.
Python
2
star
12

sofi_core

Python
1
star
13

aeddo

Automated and Early Detection of Disease Outbreaks
R
1
star
14

AEF-DDF

R
1
star
15

covid19_wgs_validation

Protocol and pipeline for montering technical artifacts in SARS-CoV-2 WGS data
1
star
16

bifrost_chewbbaca

Python
1
star
17

ecoli_pathotypes

R
1
star
18

bifrost_dashboard

Python
1
star
19

MicrobeSeq-Denmark

Location for SSI's microbial surveillance pipelines
SCSS
1
star
20

microbeseq_nbdev_augment

Files to assist in setup of nbdev
Jupyter Notebook
1
star