Sheffield Bioinformatics Core (@sheffield-bioinformatics-core)
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sheffield-bioinformatics-core

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  • Stars
    star
    36
  • Global Org. Rank 92,199 (Top 30 %)
  • Registered over 7 years ago
  • Most used languages
    Python
         50.0 %
    Shell
         16.7 %
    HTML
         16.7 %
    Nextflow     16.7 %
  • Location ๐Ÿ‡ฌ๐Ÿ‡ง United Kingdom
  • Country Total Rank 19,233
  • Country Ranking
    Nextflow     49
    HTML
         3,463
    Python
         4,758
    Shell
         5,702

Top repositories

1

periscope

A tool to quantify sub-genomic RNA (sgRNA) expression in SARS-CoV-2 artic network amplicon nanopore sequencing data.
Python
16
star
2

spatial_transcriptomics_tutorial

A bare bones tutorial on how to analyse spatial transcriptomics data from raw sequencing reads to visualising spatially distinct features
HTML
4
star
3

mMinION

mitochondrial minION data analysis pipeline
Python
3
star
4

aplanat_UoS

Simplifies bokeh plotting, particularly tailored for JupyterLab
Python
1
star
5

nf-core-user-docs

Documentation and user guides relating to deployment of nf-core pipelines on Stanage
Shell
1
star
6

nf-core-nanopath

Nextflow
1
star