RIKEN BiT (@rikenbit)
  • Stars
    star
    126
  • Global Org. Rank 51,632 (Top 17 %)
  • Registered over 10 years ago
  • Most used languages
    R
    59.3 %
    Ruby
    11.1 %
    Nextflow
    7.4 %
    Python
    7.4 %
    HTML
    7.4 %
    Shell
    3.7 %
    Julia
    3.7 %
  • Location 🇯🇵 Japan
  • Country Total Rank 3,712
  • Country Ranking
    Nextflow
    1
    R
    15
    Julia
    24
    Shell
    1,364
    HTML
    2,066
    Ruby
    2,595
    Python
    4,671

Top repositories

1

scTensor

R package for detection of cell-cell interaction using Non-negative Tensor Decomposition
R
32
star
2

OnlinePCA.jl

Online Principal Component Analysis
Julia
21
star
3

nnTensor

R package for Non-negative Tensor Decomposition
R
14
star
4

ramdaq

Nextflow
12
star
5

RamDAQ-prototype

Quality control pipeline for RamDA-seq experiments.
Nextflow
6
star
6

CCIPCA

Candit Covariance-free Incremental Principle Component Analysis (CCIPCA)
R
5
star
7

onlinePCA-experiments

Shell
5
star
8

DelayedTensor

R package for sparse and out-of-core arithmetic and decomposition of Tensor
R
4
star
9

PubMedQuery

PubMedQuery is an R package for retrieve PubMed documents
R
3
star
10

LRBaseDbi

DBI to construct LRBase-related package
R
3
star
11

gcTensor

R package for Generalised Coupled Tensor Factorisation
R
3
star
12

ttTensor

R package for Tensor-Train Decomposition
R
3
star
13

WormSCE

SingleCellExperiment objects of C. elegans
R
3
star
14

dcTensor

R package for Discrete Matrix/Tensor Decomposition
R
3
star
15

Pakunoda

A flexible data fusion framework based on generalized coupled tensor factorization
Python
2
star
16

scTensor-experiments

R
2
star
17

lrbase-workflow

Selection procedure of species used in LRBase.XXX.eg.db
R
2
star
18

AHPubMedDbs

R
1
star
19

r31biocdev

Ruby
1
star
20

scTGIF-experiments

Python
1
star
21

r31bioc214

Ruby
1
star
22

self_incomp

sakigake self-incomp
R
1
star
23

anyenv-bioruby-cookbook

HTML
1
star
24

iTensor

R package for ICA-based Matrix/Tensor Decomposition
R
1
star
25

Vicus

Vicus: Exploiting local structures to improve network-based analysis of biological data
HTML
1
star
26

anyenv-biopython-cookbook

Ruby
1
star
27

fuchikoma

BAHSICとDiffusion Mapを利用した、非線形なPCAにおける主成分に寄与した遺伝子を特定する手法
R
1
star