Raes Lab (@raeslab)
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raeslab

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  • Stars
    star
    92
  • Global Org. Rank 59,753 (Top 20 %)
  • Followers 42
  • Registered about 8 years ago
  • Most used languages
    R
         66.7 %
    Python
         25.0 %
    Java
         8.3 %
  • Location 🇧🇪 Belgium
  • Country Total Rank 1,288
  • Country Ranking
    R
         32
    Java
         168
    Python
         541

Top repositories

1

omixer-rpm

A Reference Pathways Mapper for turning metagenomic functional profiles into pathway/module profiles.
Java
24
star
2

GMMs

A manually curated database of human gut metabolic modules.
15
star
3

QMP

Quantitative Microbiome Profiling
R
15
star
4

lorepy

A library to create lore plots (logistic regression of the prevalence of a categorical variable in function of a continuous feature)
Python
11
star
5

raeslab-utils

Python
4
star
6

Enterotype-prediction-based-on-the-life-history

Machine learning classification pipe-line used for the study "Long-term life history predicts current elderly gut microbiome"
R
3
star
7

RLdbRDA

The RaesLab's implementation of a distance based Redundancy Analysis (dbRDA)
R
3
star
8

covid19_respiratory_microbiome

Code accompanying the manuscript "Clinical practices underlie COVID-19 patient respiratory microbiome composition and its interactions with the host"
R
3
star
9

temporal_variability_microbiome_qmp

R
2
star
10

loreplotr

Logistic regression plots in R
R
1
star
11

QMP-Microbiome-CRC-confounders

Scripts for the manuscript "Microbiome confounders and quantitative profiling challenge established microbial targets in colorectal cancer developmental stages"
R
1
star
12

dyspyosis

A python package to calculate the dysbiosis score in microbiome datasets
Python
1
star
13

BMIS

R
1
star