@populationgenomics
Guthub

populationgenomics

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  • Stars
    star
    34
  • Global Org. Rank 94,541 (Top 31 %)
  • Registered over 4 years ago
  • Most used languages
    Python
         85.7 %
    Cuda     7.1 %
    Dockerfile
         7.1 %
  • Location 🇦🇺 Australia
  • Country Total Rank 7,706
  • Country Ranking
    Cuda     11
    Dockerfile
         351
    Python
         1,240

Top repositories

1

production-pipelines

Genomics workflows for CPG using Hail Batch
Python
5
star
2

cpg-cost-control

A Cloud Function to handle GCP billing budget notifications.
Python
5
star
3

automated-interpretation-pipeline

Rare Disease variant prioritisation MVP
Python
5
star
4

cuKING

CUDA-based KING relatedness estimation
Cuda
3
star
5

cpg-infrastructure

This repository is used to manage the infrastructure at the CPG
Python
3
star
6

analysis-runner

Python
2
star
7

rare-disease

A collection of scripts relating to rare-disease specific projects
Python
2
star
8

images

Reusable single-software docker images
Dockerfile
1
star
9

sv-workflows

Structural Variation Workflows
Python
1
star
10

references

Reference data for bioinformatics workflows
Python
1
star
11

team-docs

Documentation, guides, tips and tricks when working at the CPG
Python
1
star
12

ClinvArbitration

A side-project from the AIP, containing the code, logic, and documentation for the ClinVar consequence reassessment process in use at the CPG
Python
1
star
13

metamist

Sample level metadata system
Python
1
star
14

joint-calling

Sample and variant QC, based on https://github.com/broadinstitute/gnomad_qc
Python
1
star