Explore @ocbe-uio Open Source projects

Oslo Centre for Biostatistics and Epidemiology (@ocbe-uio)

ocbe-uio

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67
Global Org. Rank 69,692 (Top 23 %)
Registered almost 5 years ago
Most used languages

R
52.4 %

C++
9.5 %

Python
9.5 %

MATLAB
9.5 %

Jupyter Notebook
9.5 %

TeX
4.8 %

HTML
4.8 %
Location 🇳🇴 Norway
Country Total Rank 1,214
Country Ranking

R
11

MATLAB
33

TeX
37

Jupyter Notebook
102

C++
290

Python
826

HTML
913

BayesMallows

R-package for Bayesian preference learning with the Mallows rank model.

DIscBIO

A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics

Jupyter Notebook

rBAPS

R implementation of the BAPS software for Bayesian Analysis of Population Structure

survomics

Tutorial on survival modeling with omics data

trajpy

Trajpy - empowering feature engineering for trajectory analysis across domains.

PhenoPop

Phenotypic deconvolution in heterogeneous cancer cell populations using drug screen data

RCFF

An R package to convert between R and the Citation File Format (Druskat et. al., 2019) <doi:10.5281/zenodo.1003149>.

teaching_mf9130e

Course material for MF9130E

bayesynergy

An R package for Bayesian semi-parametric modelling of in-vitro drug combination experiments

EnrichIntersect

R package for custom set enrichment analysis (CSEA) and interactive visualization of intersecting sets

psbcSpeedUp

Penalized Semiparametric Bayesian Cox Models

contingencytables

Statistical Analysis of Contingency Tables

pyPhenoPop

Phenotypic deconvolution in heterogeneous cancer cell populations using drug screen data

Cancer_simulator

R code for the cancer simulator used in manuscript "A combined experimental-computational approach uncovers a role for the Golgi matrix protein Giantin in breast cancer progression".

CellMAPtracer

A user-friendly tracking system for long-term migratory and proliferating cells

SuPerTreat

Scripts used in the project SuPerTreat

2022_bioinformatics_workshop

Course materials for 2022 Oslo Bioinformatics Workshop

public-slides

A repository for slides presented to the public or publicly-available slides

Jupyter Notebook

workshop-stat-highdim

Workshop website for Statistical Principles in Machine Learning for Small Biomedical Data

course_med3007

Course website for MED3007: Statistical Principles in Genomics

matlab2r

Translation layer from MATLAB to R