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Top repositories

1

tf-imle

Tensorflow implementation and notebooks for Implicit Maximum Likelihood Estimation
Jupyter Notebook
68
star
2

n3ic-nsdi22

Jupyter Notebook
21
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3

microbiome-mvib

Microbiome-based disease prediction with multimodal variational information bottlenecks, Grazioli et al., PLOS Computational Biology 2022
Python
21
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4

agentquest

Python
19
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5

vibtcr

Code for "Attentive Variational Information Bottleneck for TCR-peptide Interaction Prediction", Grazioli et al., Bioinformatics 2022
Jupyter Notebook
18
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6

st_tau

This repository contains code for the paper "Uncertainty Estimation and Calibration with Finite-State Probabilistic RNNs" (Wang, Lawrence & Niepert, ICLR 2021).
Python
17
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7

KGEval

A framework for evaluating Knowledge Graph Embedding Models in a fine-grained manner.
Python
15
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8

Adaptive-Message-Passing

Official Repository of Adaptive Message Passing
Jupyter Notebook
15
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9

TKG-Forecasting-Evaluation

Evaluation of Methods for Temporal Knowledge Graph Forecasting
Python
12
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10

fact-linking

Codebase for "Linking Surface Facts to Large-Scale Knowledge Graphs" (EMNLP 2023)
Python
11
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11

graph-sum-product-networks

Official Repository of ICLR 2024 paper "Tractable Probabilistic Graph Representation Learning with Graph-Induced Sum-Product Networks"
Python
7
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12

dccg

Python
7
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13

VersaMatch

VersaMatch: Ontology Matching with Weak Supervision
Python
6
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14

recurrency_baseline_tkg

A Baseline for Temporal Knowledge Graph Forecasting based on Recurrency of facts
Python
6
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15

hidden_markov_model_temporal_graphs

Official Repository of the Hidden Markov Model for Temporal Graphs (HMM4G)
Python
4
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16

keras-merge

Python
3
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17

mobility-toolkit

Jupyter Notebook
3
star
18

OpenIE_LFP

Source code for MRL 2023 paper "Improving Cross-Lingual Transfer for Open Information Extraction with Linguistic Feature Projection"
Python
3
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19

DNA-Inception

Python
2
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20

illyrian

Python
2
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21

jCall

Conveniently create shared libraries for C code from Julia code
Julia
2
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22

neoagdt

Optimizing personalized neoantigen vaccines by simulating cancer cells
Jupyter Notebook
2
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23

syslrn-EuroMLSys22

1
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24

tungl

C++
1
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25

vrain-dataset

1
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26

tc-hard

Experiments for "On TCR Binding Predictors Failing to Generalize to Unseen Peptides", Grazioli et al., Frontiers in Immunology 2022
Jupyter Notebook
1
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27

interpreting-node-embedding

This repository contains code for the paper 'Interpreting Node Embedding with Text-labeled Graphs' (Serra, Xu, Niepert, Lawrence, Tino & Yao, IJCNN 2021)
Jupyter Notebook
1
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28

gradpath

Python
1
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29

class_distributions_graphs_tabular_data

Official Repository of NeurIPS 2023 paper "On Class Distributions Induced by Nearest Neighbor Graphs for Node Classification of Tabular Data"
Jupyter Notebook
1
star