Explore @metaspace2020 Open Source projects

METASPACE (@metaspace2020)

metaspace2020

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98
Global Org. Rank 58,510 (Top 19 %)
Registered over 9 years ago
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Location 🇩🇪 Germany
Country Total Rank 11,344
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metaspace

Cloud engine and platform for metabolite annotation for imaging mass spectrometry

Lithops-METASPACE

Lithops-based Serverless implementation of the METASPACE spatial metabolomics annotation pipeline

Jupyter Notebook

metaspace-converter

Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData

sm-engine

Engine for metabolite annotation for imaging mass spectrometry

coloc

Methods for measuring co-localization of ion images

offsample

Project to develop methods to recognize off-sample mass spectrometry images

Jupyter Notebook

sm-webapp

Frontend of METASPACE web application

survey

Results of a community survey on imaging mass spectrometry in 2015

Jupyter Notebook

sm-engine-ansible

Setting up cloud infrastructure for the engine using Ansible

centroidize

helper webapp for SCiLS export to METASPACE

metaspace-website

Main website of the METASPACE project

metadata

Metadata for imaging mass spectrometry

ims-simulator

Simulation of HR imaging mass spectrometry data