Explore @merenlab Open Source projects

Meren Lab (@merenlab)

merenlab

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639
Global Org. Rank 20,552 (Top 7 %)
Registered about 8 years ago
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Python
64.3 %

HTML
14.3 %

Shell
7.1 %

Jupyter Notebook
7.1 %

R
7.1 %
Location 🇩🇪 Germany
Country Total Rank 2,605
Country Ranking

R
330

Python
380

Jupyter Notebook
1,278

HTML
1,729

Shell
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anvio

An analysis and visualization platform for 'omics data

illumina-utils

A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).

oligotyping

Exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa

reads-for-assembly

Simulate metagenomic short reads from one or more populations.

world-map-r

A simple script to display stuff on a world map with R and ggplot

MerenLab-workflows

A repository with scripts to run pipeline that are commonly used in the Meren Lab

merenlab.org

Web content for Meren Lab

Jupyter Notebook

tRNA-seq-tools

anviserver

The code behind anvi'server

anvio.org

The anvi'o community web page

SAAV-structural-mapping

Map single amino acid variants onto protein structures. Modus operandi: explore relationships between genetic variation and structural biology.

google-scholar-parser

A set of Python utilities to parse Google Scholar data

barhal-bot

Our little Slack Bot that helps us keep an eye on our server

mentorship-survey-workflow

homebrew-anvio