Explore @matsunagalab Open Source projects

@matsunagalab

matsunagalab

Stars
31
Global Org. Rank 97,465 (Top 32 %)
Registered over 5 years ago
Most used languages

Jupyter Notebook
62.5 %

Rich Text Format 12.5 %

Shell
12.5 %

Julia
12.5 %
Location 🇯🇵 Japan
Country Total Rank 9,085
Country Ranking

Rich Text Format 10

Julia
25

Jupyter Notebook
534

Shell
2,007

MDToolbox.jl

MDToolbox.jl: A Julia package for molecular dynamics trajectories analysis and modeling of biomolecules

tutorial_hmm

Hands-on tutorials for Markov state modeling of MD and EXP data

Jupyter Notebook

ColabBTR

End-to-end differentiable blind tip reconstruction on Colab implemented with PyTorch

Jupyter Notebook

docker-openmm

dockerfile for openmm

lecture_ML

Google colab notebooks used in a lecture on machine learning

Jupyter Notebook

tutorial_analyzingMDdata

Google colab notebooks for typical MD trajectory analysis routines with Python

Jupyter Notebook

deprecated_afm

AFM image analysis using similar approaches proposed by BioEM

Jupyter Notebook

paper_higashida2021

Rich Text Format